RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 F8W8V4 182 aa14.39□□□□□ -0.11
APP-211ENST00000462267 H0YGG7 62 aa14.39□□□□□ -0.11
APP-211ENST00000462267 NME2P1O60361 137 aa14.39□□□□□ -0.11
APP-211ENST00000462267 CST8O60676 142 aa14.39□□□□□ -0.11
APP-211ENST00000462267 SLC25A12O75746 678 aa14.39□□□□□ -0.11
APP-211ENST00000462267 NME2P22392 152 aa14.39□□□□□ -0.11
APP-211ENST00000462267 ARF3P61204 181 aaPredicted RBP14.39□□□□□ -0.11
APP-211ENST00000462267 NAA25Q14CX7 972 aa14.39□□□□□ -0.11
APP-211ENST00000462267 EXT1Q16394 746 aa14.39□□□□□ -0.11
APP-211ENST00000462267 FIGNQ5HY92 759 aa14.39□□□□□ -0.11
APP-211ENST00000462267 FBXO42Q6P3S6 717 aa14.39□□□□□ -0.11
APP-211ENST00000462267 MFSD7Q6UXD7 560 aa14.39□□□□□ -0.11
APP-211ENST00000462267 LGI4Q8N135 537 aa14.39□□□□□ -0.11
APP-211ENST00000462267 CPSF7Q8N684 471 aaKnown RBP14.39□□□□□ -0.11
APP-211ENST00000462267 ACRBPQ8NEB7 543 aa14.39□□□□□ -0.11
APP-211ENST00000462267 GOT1L1Q8NHS2 421 aaPredicted RBP14.39□□□□□ -0.11
APP-211ENST00000462267 M1APQ8TC57 530 aa14.39□□□□□ -0.11
APP-211ENST00000462267 CTNNBL1Q8WYA6 563 aaPredicted RBP14.39□□□□□ -0.11
APP-211ENST00000462267 QKIQ96PU8 341 aaKnown RBP eCLIP14.39□□□□□ -0.11
APP-211ENST00000462267 CYTH2Q99418 400 aa14.39□□□□□ -0.11
APP-211ENST00000462267 MIPEPQ99797 713 aa14.39□□□□□ -0.11
APP-211ENST00000462267 GPATCH1Q9BRR8 931 aaKnown RBP14.39□□□□□ -0.11
APP-211ENST00000462267 VN1R1Q9GZP7 353 aa14.39□□□□□ -0.11
APP-211ENST00000462267 MMP25Q9NPA2 562 aa14.39□□□□□ -0.11
APP-211ENST00000462267 NLE1Q9NVX2 485 aaPredicted RBP14.39□□□□□ -0.11
APP-211ENST00000462267 DDX56Q9NY93 547 aaKnown RBP14.39□□□□□ -0.11
APP-211ENST00000462267 FEZ2Q9UHY8 353 aaPredicted RBP14.39□□□□□ -0.11
APP-211ENST00000462267 RUVBL1Q9Y265 456 aaKnown RBP14.39□□□□□ -0.11
APP-211ENST00000462267 ATRQ13535 2644 aa14.39□□□□□ -0.11
APP-211ENST00000462267 OR2A25A4D2G3 310 aa14.38□□□□□ -0.11
APP-211ENST00000462267 HACD1B0YJ81 288 aa14.38□□□□□ -0.11
APP-211ENST00000462267 TFECO14948 347 aaPredicted RBP14.38□□□□□ -0.11
APP-211ENST00000462267 NRP2O60462 931 aa14.38□□□□□ -0.11
APP-211ENST00000462267 MAN1A2O60476 641 aa14.38□□□□□ -0.11
APP-211ENST00000462267 PHF2O75151 1096 aa14.38□□□□□ -0.11
APP-211ENST00000462267 ST13P50502 369 aaKnown RBP14.38□□□□□ -0.11
APP-211ENST00000462267 CSE1LP55060 971 aaKnown RBP14.38□□□□□ -0.11
APP-211ENST00000462267 PMPCAQ10713 525 aa14.38□□□□□ -0.11
APP-211ENST00000462267 TTC23LQ6PF05 361 aa14.38□□□□□ -0.11
APP-211ENST00000462267 RBM43Q6ZSC3 357 aaKnown RBP14.38□□□□□ -0.11
APP-211ENST00000462267 LANCL3Q6ZV70 420 aa14.38□□□□□ -0.11
APP-211ENST00000462267 ZZZ3Q8IYH5 903 aa14.38□□□□□ -0.11
APP-211ENST00000462267 RAB42Q8N4Z0 105 aa14.38□□□□□ -0.11
APP-211ENST00000462267 CSNK1A1LQ8N752 337 aa14.38□□□□□ -0.11
APP-211ENST00000462267 LRRN4CLQ8ND94 238 aa14.38□□□□□ -0.11
APP-211ENST00000462267 CFAP61Q8NHU2 1237 aa14.38□□□□□ -0.11
APP-211ENST00000462267 ASZ1Q8WWH4 475 aa14.38□□□□□ -0.11
APP-211ENST00000462267 CDKN2AIPNLQ96HQ2 116 aa14.38□□□□□ -0.11
APP-211ENST00000462267 DRC3Q9H069 523 aa14.38□□□□□ -0.11
APP-211ENST00000462267 ARNT2Q9HBZ2 717 aa14.38□□□□□ -0.11
APP-211ENST00000462267 IMPACTQ9P2X3 320 aa14.38□□□□□ -0.11
APP-211ENST00000462267 NENFQ9UMX5 172 aa14.38□□□□□ -0.11
APP-211ENST00000462267 ALG6Q9Y672 507 aa14.38□□□□□ -0.11
APP-211ENST00000462267 FOXS1O43638 330 aa14.37□□□□□ -0.11
APP-211ENST00000462267 PRMT3O60678 531 aa14.37□□□□□ -0.11
APP-211ENST00000462267 VPS26AO75436 327 aa14.37□□□□□ -0.11
APP-211ENST00000462267 PSMB5P28074 263 aa14.37□□□□□ -0.11
APP-211ENST00000462267 CDKN2BP42772 138 aa14.37□□□□□ -0.11
APP-211ENST00000462267 AGTR2P50052 363 aa14.37□□□□□ -0.11
APP-211ENST00000462267 DLX5P56178 289 aa14.37□□□□□ -0.11
APP-211ENST00000462267 NUP107P57740 925 aa14.37□□□□□ -0.11
APP-211ENST00000462267 TAS2R50P59544 299 aa14.37□□□□□ -0.11
APP-211ENST00000462267 HSPA14Q0VDF9 509 aa14.37□□□□□ -0.11
APP-211ENST00000462267 PRPSAP1Q14558 356 aa14.37□□□□□ -0.11
APP-211ENST00000462267 SYT16Q17RD7 645 aa14.37□□□□□ -0.11
APP-211ENST00000462267 DEFB113Q30KQ7 82 aa14.37□□□□□ -0.11
APP-211ENST00000462267 DENND5AQ6IQ26 1287 aa14.37□□□□□ -0.11
APP-211ENST00000462267 LRRC8BQ6P9F7 803 aa14.37□□□□□ -0.11
APP-211ENST00000462267 ARSKQ6UWY0 536 aa14.37□□□□□ -0.11
APP-211ENST00000462267 MICALCLQ6ZW33 695 aa14.37□□□□□ -0.11
APP-211ENST00000462267 CDC20BQ86Y33 519 aa14.37□□□□□ -0.11
APP-211ENST00000462267 VRK3Q8IV63 474 aa14.37□□□□□ -0.11
APP-211ENST00000462267 OR2A1Q8NGT9 310 aa14.37□□□□□ -0.11
APP-211ENST00000462267 HMGCLL1Q8TB92 370 aa14.37□□□□□ -0.11
APP-211ENST00000462267 A0A0A6YYC8 382 aaPredicted RBP14.36□□□□□ -0.11
APP-211ENST00000462267 SOWAHDA6NJG2 315 aa14.36□□□□□ -0.11
APP-211ENST00000462267 I3L1I5 382 aaPredicted RBP14.36□□□□□ -0.11
APP-211ENST00000462267 TXNDC9O14530 226 aa14.36□□□□□ -0.11
APP-211ENST00000462267 GPC4O75487 556 aa14.36□□□□□ -0.11
APP-211ENST00000462267 TFEBP19484 476 aa14.36□□□□□ -0.11
APP-211ENST00000462267 HOXC12P31275 282 aa14.36□□□□□ -0.11
APP-211ENST00000462267 CCR7P32248 378 aa14.36□□□□□ -0.11
APP-211ENST00000462267 TYRO3Q06418 890 aa14.36□□□□□ -0.11
APP-211ENST00000462267 FAM53BQ14153 422 aa14.36□□□□□ -0.11
APP-211ENST00000462267 STX1AQ16623 288 aa14.36□□□□□ -0.11
APP-211ENST00000462267 HKDC1Q2TB90 917 aa14.36□□□□□ -0.11
APP-211ENST00000462267 ARHGAP11AQ6P4F7 1023 aa14.36□□□□□ -0.11
APP-211ENST00000462267 SASS6Q6UVJ0 657 aa14.36□□□□□ -0.11
APP-211ENST00000462267 PAMR1Q6UXH9 720 aa14.36□□□□□ -0.11
APP-211ENST00000462267 RPRMLQ8N4K4 120 aa14.36□□□□□ -0.11
APP-211ENST00000462267 ARHGEF39Q8N4T4 335 aa14.36□□□□□ -0.11
APP-211ENST00000462267 TMEM125Q96AQ2 219 aa14.36□□□□□ -0.11
APP-211ENST00000462267 RAD51AP1Q96B01 352 aa14.36□□□□□ -0.11
APP-211ENST00000462267 TBL1YQ9BQ87 522 aa14.36□□□□□ -0.11
APP-211ENST00000462267 DPH7Q9BTV6 452 aa14.36□□□□□ -0.11
APP-211ENST00000462267 SLC6A16Q9GZN6 736 aa14.36□□□□□ -0.11
APP-211ENST00000462267 TRIM45Q9H8W5 580 aaPredicted RBP14.36□□□□□ -0.11
APP-211ENST00000462267 NBEAL1Q6ZS30 2694 aa14.36□□□□□ -0.11
APP-211ENST00000462267 FBN1P35555 2871 aaKnown RBP14.35□□□□□ -0.11
APP-211ENST00000462267 CDC40O60508 579 aaKnown RBP eCLIP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms