RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 EXOC6Q8TAG9 804 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 CCDC107Q8WV48 283 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 P2RX5Q93086 422 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 PYCR2Q96C36 320 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 MRPL38Q96DV4 380 aaKnown RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 DTD2Q96FN9 168 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 EPSTI1Q96J88 318 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 FAM71F1Q96KD3 344 aaPredicted RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 OR1F2PQ96R84 312 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 CTAGE1Q96RT6 745 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 MYADMQ96S97 322 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 PKP2Q99959 881 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 NTPCRQ9BSD7 190 aaKnown RBP2.78□□□□□ -1.97
HPS3-203ENST00000460822 VN1R1Q9GZP7 353 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 ARRDC1-AS1Q9H2J1 176 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 CUEDC2Q9H467 287 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 Q9H8V8 135 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 SLC35D1Q9NTN3 355 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 LRWD1Q9UFC0 647 aa2.78□□□□□ -1.97
HPS3-203ENST00000460822 MIA2Q96PC5 1412 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 TRAV24A0A0B4J272 114 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 ZCWPW2A0A1B0GU75 182 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 LILRA5A6NI73 299 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 GAPDHSO14556 408 aaPredicted RBP2.77□□□□□ -1.97
HPS3-203ENST00000460822 RASGRF2O14827 1237 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 KCNAB3O43448 404 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 LDB3O75112 727 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 RAD51DO75771 328 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 APBB3O95704 486 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 PTBP3O95758 552 aaKnown RBP2.77□□□□□ -1.97
HPS3-203ENST00000460822 MT-ATP6P00846 226 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 FAM106CPP0CH98 169 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 KRT13P13646 458 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 CYP2A7P20853 494 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 CHRNA3P32297 505 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 HTR6P50406 440 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 CX3CL1P78423 397 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 ARHGAP1Q07960 439 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 LRRC74AQ0VAA2 488 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 ZNF155Q12901 538 aaPredicted RBP2.77□□□□□ -1.97
HPS3-203ENST00000460822 CALCRLQ16602 461 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 FAM166AQ6J272 317 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 NEK5Q6P3R8 708 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 RHBDF2Q6PJF5 856 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 COLCA1Q6ZS62 124 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 MEX3DQ86XN8 651 aaKnown RBP2.77□□□□□ -1.97
HPS3-203ENST00000460822 CROCCP3Q8IVE0 287 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 KLHDC8AQ8IYD2 350 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 BATF2Q8N1L9 274 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 SMRP1Q8NCR6 262 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 PPFIBP2Q8ND30 876 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 DENND6BQ8NEG7 585 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 FGFBP3Q8TAT2 258 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 FAM46BQ96A09 425 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 SCMH1Q96GD3 660 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 SAMD8Q96LT4 415 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 CDK19Q9BWU1 502 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 TM6SF1Q9BZW5 370 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 SLC39A8Q9C0K1 460 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 VPS33BQ9H267 617 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 RWDD1Q9H446 243 aaPredicted RBP2.77□□□□□ -1.97
HPS3-203ENST00000460822 PHPT1Q9NRX4 125 aaPredicted RBP2.77□□□□□ -1.97
HPS3-203ENST00000460822 TMEM30AQ9NV96 361 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 AATFQ9NY61 560 aaKnown RBP eCLIP2.77□□□□□ -1.97
HPS3-203ENST00000460822 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.77□□□□□ -1.97
HPS3-203ENST00000460822 ZNF624Q9P2J8 865 aaPredicted RBP2.77□□□□□ -1.97
HPS3-203ENST00000460822 MAD2L2Q9UI95 211 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 DAPK2Q9UIK4 370 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 SIX4Q9UIU6 781 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 CCPG1Q9ULG6 757 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 EXOC6BQ9Y2D4 811 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 PCDHAC2Q9Y5I4 1007 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 MAGI3Q5TCQ9 1506 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 MBD5Q9P267 1494 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 LRPPRCP42704 1394 aaKnown RBP2.77□□□□□ -1.97
HPS3-203ENST00000460822 MTUS2Q5JR59 1369 aa2.77□□□□□ -1.97
HPS3-203ENST00000460822 FAM205AQ6ZU69 1335 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 NPHP3Q7Z494 1330 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 TRBV2A0A0J9YWF9 115 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 ILVBLA1L0T0 632 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 CASTOR2A6NHX0 329 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 F8VVB4 439 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 F8VWA3 439 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 ZNHIT1O43257 154 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 KCNJ13O60928 360 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 AKR7A3O95154 331 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 OAZ2O95190 189 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 CXCL14O95715 111 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 SERPING1P05155 500 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 RPS2P15880 293 aaKnown RBP2.76□□□□□ -1.97
HPS3-203ENST00000460822 UGT1A6P19224 532 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 CDKN1AP38936 164 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 RPL21P46778 160 aaKnown RBP2.76□□□□□ -1.97
HPS3-203ENST00000460822 OR3A1P47881 315 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 HNMTP50135 292 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 PDX1P52945 283 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 PRKCEQ02156 737 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 GCNT1Q02742 428 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 RASGEF1BQ0VAM2 473 aa2.76□□□□□ -1.97
HPS3-203ENST00000460822 TRAF3Q13114 568 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms