RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 C7orf72A4D263 438 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TMEM150BA6NC51 233 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TMEM233B4DJY2 109 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SPATA31C2B4DYI2 1134 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SMIM22K7EJ46 135 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 NME4O00746 187 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 PCDH17O14917 1159 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CDC40O60508 579 aaKnown RBP eCLIP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 PPP1R11O60927 126 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 B3GAT3O94766 335 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SOX30O94993 753 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 IFNA17P01571 189 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 FGF4P08620 206 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 DARSP14868 501 aaKnown RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CTPS1P17812 591 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CHRNA5P30532 468 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ICAM3P32942 547 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 MAGEA12P43365 314 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 DGKGP49619 791 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 BOP1Q14137 746 aaKnown RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 USP41Q3LFD5 358 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CES5AQ6NT32 575 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 C3P1Q6ZMU1 363 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 MIB1Q86YT6 1006 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ZBTB2Q8N680 514 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SNX33Q8WV41 574 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 L3HYPDHQ96EM0 354 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 S100A16Q96FQ6 103 aaKnown RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 LRCH3Q96II8 777 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SORT1Q99523 831 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 COPS8Q99627 209 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CACNG6Q9BXT2 260 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 GORASP2Q9H8Y8 452 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 AGO3Q9H9G7 860 aaKnown RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TCF7L1Q9HCS4 588 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TAS2R8Q9NYW2 309 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 IL20Q9NYY1 176 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SCP2D1Q9UJQ7 156 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CNTNAP1P78357 1384 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 A0A1B0GVC2 190 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 NEMP2A6NFY4 417 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 DDTLA6NHG4 134 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 C9JVG2 144 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 LCMT2O60294 686 aaKnown RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SLC43A1O75387 559 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SNAPINO95295 136 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 C3P01024 1663 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 IL1AP01583 271 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ANXA4P09525 319 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 HPGDP15428 266 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 RAB3BP20337 219 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CD247P20963 164 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CERS1P27544 350 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 HLA-DMAP28067 261 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 GCAP28676 217 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 S100GP29377 79 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 MMP12P39900 470 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 BUD31P41223 144 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TNFSF9P41273 254 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 MANFP55145 182 aaKnown RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 BACE1P56817 501 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 EMX1Q04741 257 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SNTB2Q13425 540 aaKnown RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SCARB2Q14108 478 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 GK2Q14410 553 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 FAM69AQ5T7M9 428 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF691Q5VV52 312 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 UBE2R2Q712K3 238 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 OTOP3Q7RTS5 596 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF598Q86UK7 904 aaKnown RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ZFAND4Q86XD8 727 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SIAH1Q8IUQ4 282 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 LYSMD2Q8IV50 215 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TMEM74Q96NL1 305 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TRIB3Q96RU7 358 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SEPT5Q99719 369 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 NEURL2Q9BR09 285 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 NDC1Q9BTX1 674 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 MRI1Q9BV20 369 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 BEX2Q9BXY8 128 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ARL6Q9H0F7 186 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 IFT22Q9H7X7 185 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ACOT13Q9NPJ3 140 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SDR39U1Q9NRG7 319 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 IL37Q9NZH6 218 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 NLKQ9UBE8 527 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 FBXW11Q9UKB1 542 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 RNF11Q9Y3C5 154 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 NAALAD2Q9Y3Q0 740 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 DUOX1Q9NRD9 1551 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 IGKV6D-41A0A0C4DH26 115 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 KRT33AO76009 404 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 VNN1O95497 513 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CST3P01034 146 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 C1QBP02746 253 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TACSTD2P09758 323 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 EBLN1P0CF75 366 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 GKN3PP0CG01 181 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ENGP17813 658 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 UBA1P22314 1058 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms