RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 POMZP3Q6PJE2 187 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 ZNF730Q6ZMV8 503 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 LUZP2Q86TE4 346 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 OR2A12Q8NGT7 310 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 OR5AK3PQ8NH89 298 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 OSBPL11Q9BXB4 747 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 IL21RQ9HBE5 538 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 CLCA3PQ9Y6N3 262 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 FAM149AA5PLN7 773 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 CACNG3O60359 315 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 JUNP05412 331 aaKnown RBP7.18□□□□□ -1.26
SYNE1-213ENST00000448038 PGRP06401 933 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 ATXN1LP0C7T5 689 aaKnown RBP7.18□□□□□ -1.26
SYNE1-213ENST00000448038 CYP4B1P13584 511 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 ENGP17813 658 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 RYKP34925 604 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 IL12RB1P42701 662 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 SPANXN4Q5MJ08 99 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 SLC2A7Q6PXP3 512 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 CADM2Q8N3J6 435 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 ZNF248Q8NDW4 579 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 FUBP1Q96AE4 644 aaKnown RBP7.18□□□□□ -1.26
SYNE1-213ENST00000448038 C17orf62Q9BQA9 187 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 SLC39A3Q9BRY0 314 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 YIPF4Q9BSR8 244 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 PDP1Q9P0J1 537 aaPredicted RBP7.18□□□□□ -1.26
SYNE1-213ENST00000448038 PCDHGA2Q9Y5H1 932 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 ATAD5Q96QE3 1844 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 A8MUA0 341 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 SERPINA1P01009 418 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 AGXTP21549 392 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 ADRA1AP35348 466 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 MLLT1Q03111 559 aaPredicted RBP7.18□□□□□ -1.26
SYNE1-213ENST00000448038 PPP1R3AQ16821 1122 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 C6orf136Q5SQH8 315 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 TMEM164Q5U3C3 297 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 PTCRAQ6ISU1 281 aaPredicted RBP7.18□□□□□ -1.26
SYNE1-213ENST00000448038 CXorf57Q6NSI4 855 aaKnown RBP7.18□□□□□ -1.26
SYNE1-213ENST00000448038 ABRAXAS1Q6UWZ7 409 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 AMIGO1Q86WK6 493 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 PEX5LQ8IYB4 626 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 OR13J1Q8NGT2 312 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 CD200R1Q8TD46 325 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 SPATA7Q9P0W8 599 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 PCDH10Q9P2E7 1040 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 SERTAD3Q9UJW9 196 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 DLGAP4Q9Y2H0 992 aa7.18□□□□□ -1.26
SYNE1-213ENST00000448038 TNFRSF11BO00300 401 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 EIF3FO00303 357 aaPredicted RBP7.17□□□□□ -1.26
SYNE1-213ENST00000448038 GABBR2O75899 941 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 IL7RP16871 459 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 AOC1P19801 751 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 IL12BP29460 328 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 SOX6P35712 828 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 YAP1P46937 504 aaKnown RBP7.17□□□□□ -1.26
SYNE1-213ENST00000448038 HNRNPKP61978 463 aaKnown RBP eCLIP7.17□□□□□ -1.26
SYNE1-213ENST00000448038 MRPS21P82921 87 aaKnown RBP7.17□□□□□ -1.26
SYNE1-213ENST00000448038 TOP3AQ13472 1001 aaPredicted RBP7.17□□□□□ -1.26
SYNE1-213ENST00000448038 TICAM1Q8IUC6 712 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 TEX26Q8N6G2 289 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 OR52J3Q8NH60 311 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 Q96MT0 163 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 APOOQ9BUR5 198 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 PCDHAC1Q9H158 963 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 RMI1Q9H9A7 625 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 PDE10AQ9Y233 779 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 AP4B1Q9Y6B7 739 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 DUXAA6NLW8 204 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 C9J4A7 227 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 B4GALT2O60909 372 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 KCNJ13O60928 360 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 PDYNP01213 254 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 TFPIP10646 304 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 CD247P20963 164 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 MASP1P48740 699 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 CRISP3P54108 245 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 PDK3Q15120 406 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 DUOXA1Q1HG43 343 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 C10orf62Q5T681 223 aaPredicted RBP7.17□□□□□ -1.26
SYNE1-213ENST00000448038 HIPK1Q86Z02 1210 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 DENND1AQ8TEH3 1009 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 ZDHHC12Q96GR4 267 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 DGAT2Q96PD7 388 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 IGSF5Q9NSI5 407 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 ZNF229Q9UJW7 825 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 FZD4Q9ULV1 537 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 A0A1W2PP18 115 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 hCG_2039718K7EN88 272 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 CAPN5O15484 640 aaPredicted RBP7.17□□□□□ -1.26
SYNE1-213ENST00000448038 GPR39O43194 453 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 IGFALSP35858 605 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 CHN2P52757 468 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 PSMD4P55036 377 aaKnown RBP7.17□□□□□ -1.26
SYNE1-213ENST00000448038 DIO3P55073 304 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 CLDN2P57739 230 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 EEFSECP57772 596 aaKnown RBP7.17□□□□□ -1.26
SYNE1-213ENST00000448038 FOLH1Q04609 750 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 ZNF763Q0D2J5 394 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 DOC2AQ14183 400 aa7.17□□□□□ -1.26
SYNE1-213ENST00000448038 PDCD4Q53EL6 469 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms