RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 COX15Q7KZN9 410 aa22.9■■□□□ 1.26
MRPL28-205ENST00000447696 STRA8Q7Z7C7 330 aa22.9■■□□□ 1.26
MRPL28-205ENST00000447696 HIST1H2AHQ96KK5 128 aa22.9■■□□□ 1.26
MRPL28-205ENST00000447696 OR2A5Q96R48 311 aa22.9■■□□□ 1.26
MRPL28-205ENST00000447696 HIST1H2AJQ99878 128 aa22.9■■□□□ 1.26
MRPL28-205ENST00000447696 H2AFJQ9BTM1 129 aa22.9■■□□□ 1.26
MRPL28-205ENST00000447696 SLC25A23Q9BV35 468 aa22.9■■□□□ 1.26
MRPL28-205ENST00000447696 USP9YO00507 2555 aaPredicted RBP22.89■■□□□ 1.25
MRPL28-205ENST00000447696 PABPN1LA6NDY0 278 aaKnown RBP22.89■■□□□ 1.25
MRPL28-205ENST00000447696 TXNDC9O14530 226 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 UMODP07911 640 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 ENO2P09104 434 aaPredicted RBP22.89■■□□□ 1.25
MRPL28-205ENST00000447696 CASRP41180 1078 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 CCL11P51671 97 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 PGDP52209 483 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 CKAP4Q07065 602 aaKnown RBP22.89■■□□□ 1.25
MRPL28-205ENST00000447696 PHKG1Q16816 387 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 GARNL3Q5VVW2 1013 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 CSNK1A1LQ8N752 337 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 RERGQ96A58 199 aaPredicted RBP22.89■■□□□ 1.25
MRPL28-205ENST00000447696 MVB12AQ96EY5 273 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 C10orf90Q96M02 699 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 TRIM54Q9BYV2 358 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 SAYSD1Q9NPB0 183 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 ABCF3Q9NUQ8 709 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 TMEM184CQ9NVA4 438 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 CUEDC1Q9NWM3 386 aaPredicted RBP22.89■■□□□ 1.25
MRPL28-205ENST00000447696 G3BP2Q9UN86 482 aaKnown RBP22.89■■□□□ 1.25
MRPL28-205ENST00000447696 PCDHGB7Q9Y5F8 929 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 SPTAN1Q13813 2472 aaKnown RBP22.89■■□□□ 1.25
MRPL28-205ENST00000447696 PCM1Q15154 2024 aa22.89■■□□□ 1.25
MRPL28-205ENST00000447696 K7EM74 188 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 PEX12O00623 359 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 ZNF37AP17032 561 aaPredicted RBP22.88■■□□□ 1.25
MRPL28-205ENST00000447696 NKG7Q16617 165 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 CYS1Q717R9 158 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 PPP1R32Q7Z5V6 425 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 ADCK2Q7Z695 626 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 ANKRD7Q92527 254 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 FER1L6-AS2Q96M78 137 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 SPSB2Q99619 263 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 MCMBPQ9BTE3 642 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 SGPP1Q9BX95 441 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 RHOJQ9H4E5 214 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 ZNF304Q9HCX3 659 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 CDC14AQ9UNH5 594 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 NOVA2Q9UNW9 492 aaKnown RBP22.88■■□□□ 1.25
MRPL28-205ENST00000447696 NOTCH2Q04721 2471 aa22.88■■□□□ 1.25
MRPL28-205ENST00000447696 FAM95CA0A1B0GW59 222 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 CLEC18AA5D8T8 446 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 HAT1O14929 419 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 MED26O95402 600 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 GSTA2P09210 222 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 ATXN8OSP0DMR3 200 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 NR1D1P20393 614 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 MMP11P24347 488 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 OR1D4P47884 311 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 FOXK1P85037 733 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 CLEC18BQ6UXF7 455 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 MBOAT1Q6ZNC8 495 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 NKAPQ8N5F7 415 aaKnown RBP22.87■■□□□ 1.25
MRPL28-205ENST00000447696 CLEC18CQ8NCF0 446 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.87■■□□□ 1.25
MRPL28-205ENST00000447696 ATL1Q8WXF7 558 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 CDKL2Q92772 493 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 CABS1Q96KC9 395 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 SYNPO2LQ9H987 977 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 POPDC3Q9HBV1 291 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 ARL15Q9NXU5 204 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 CDC23Q9UJX2 597 aa22.87■■□□□ 1.25
MRPL28-205ENST00000447696 RUVBL1Q9Y265 456 aaKnown RBP22.87■■□□□ 1.25
MRPL28-205ENST00000447696 NBASA2RRP1 2371 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 HEATR5BQ9P2D3 2071 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 VSTM2BA6NLU5 285 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 H7BY64 318 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 PRPF4O43172 522 aaKnown RBP eCLIP22.86■■□□□ 1.257e-9■■■■■ 28.8
MRPL28-205ENST00000447696 PDGFAP04085 211 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 NAE1Q13564 534 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 DCAF10Q5QP82 559 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 CAPN13Q6MZZ7 669 aaPredicted RBP22.86■■□□□ 1.25
MRPL28-205ENST00000447696 LCTLQ6UWM7 567 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 C17orf64Q86WR6 236 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 HPS6Q86YV9 775 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 METTL27Q8N6F8 245 aaPredicted RBP22.86■■□□□ 1.25
MRPL28-205ENST00000447696 FBXL8Q96CD0 374 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 THAP11Q96EK4 314 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 VPS39Q96JC1 886 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 PRAP1Q96NZ9 151 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 HAUS8Q9BT25 410 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 ATG10Q9H0Y0 220 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 EPN3Q9H201 632 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 P4HTMQ9NXG6 502 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 CTSFQ9UBX1 484 aa22.86■■□□□ 1.25
MRPL28-205ENST00000447696 PCSK5Q92824 1860 aa22.85■■□□□ 1.25
MRPL28-205ENST00000447696 KCNE1BA0A087WTH5 132 aa22.85■■□□□ 1.25
MRPL28-205ENST00000447696 SSTR1P30872 391 aa22.85■■□□□ 1.25
MRPL28-205ENST00000447696 PGGT1BP53609 377 aa22.85■■□□□ 1.25
MRPL28-205ENST00000447696 PLTPP55058 493 aa22.85■■□□□ 1.25
MRPL28-205ENST00000447696 TAS2R39P59534 338 aa22.85■■□□□ 1.25
MRPL28-205ENST00000447696 RPS15AP62244 130 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms