RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 EPCAMP16422 314 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 IL11P20809 199 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 EEF1B2P24534 225 aaKnown RBP3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 SHC1P29353 583 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 MS4A2Q01362 244 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 ACSM1Q08AH1 577 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 ELAVL2Q12926 359 aaKnown RBP3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 CDH18Q13634 790 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 RAPSNQ13702 412 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 TMEM132DQ14C87 1099 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 CRY2Q49AN0 593 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 ARMC4Q5T2S8 1044 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 CES4AQ5XG92 561 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 NAA16Q6N069 864 aaPredicted RBP3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 GPRIN3Q6ZVF9 776 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 RYBPQ8N488 228 aaPredicted RBP3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 RASGEF1AQ8N9B8 481 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 AQP11Q8NBQ7 271 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 NOA1Q8NC60 698 aaKnown RBP3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 NUP37Q8NFH4 326 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 KCNE4Q8WWG9 221 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 ROBO4Q8WZ75 1007 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 PROX1Q92786 737 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 PRICKLE1Q96MT3 831 aaPredicted RBP3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 TBC1D7Q9P0N9 293 aa3.63□□□□□ -1.83
AC003001.1-201ENST00000443247 TDRD15B5MCY1 1934 aaKnown RBP3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 SYNDIG1LA6NDD5 238 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 EPM2AB3EWF7 344 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 PI4K2BG5E9Z4 385 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 CCL24O00175 119 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 SNX3O60493 162 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 DIAPH2O60879 1101 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 RPS6KA5O75582 802 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 KRT33AO76009 404 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 CPT2P23786 658 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 RBMS1P29558 406 aaKnown RBP3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 RAB28P51157 221 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 TMEM50BP56557 158 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 CLDN15P56746 228 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 CALD1Q05682 793 aaKnown RBP3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 RBPJQ06330 500 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 PRPF4BQ13523 1007 aaKnown RBP3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 TRIM29Q14134 588 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 MTHFSDQ2M296 383 aaKnown RBP3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 TCTEX1D4Q5JR98 221 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 ZNF343Q6P1L6 599 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 FRRS1Q6ZNA5 592 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 RBPMS2Q6ZRY4 209 aaKnown RBP3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 IL17RELQ6ZVW7 336 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 P2RY8Q86VZ1 359 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 XXYLT1Q8NBI6 393 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 KCTD6Q8NC69 237 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 HDAC11Q96DB2 347 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 RPS10P5Q9NQ39 176 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 GSN-AS1Q9NRJ2 163 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 TXNDC16Q9P2K2 825 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 MUTYHQ9UIF7 546 aa3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 MYH14Q7Z406 1995 aaKnown RBP3.62□□□□□ -1.83
AC003001.1-201ENST00000443247 COL5A2P05997 1499 aaPredicted RBP3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 ARAP1Q96P48 1450 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 IGHV3OR16-10A0A075B7F0 116 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 TRBV4-1A0A0J9YWV2 114 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 ATP6AP2O75787 350 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 BAG3O95817 575 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 GSRP00390 522 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 OR52Z1P0C646 297 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 MYBL1P10243 752 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 GATA2P23769 480 aaPredicted RBP3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 SOX3P41225 446 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 UBASH3AP57075 661 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 RASGEF1BQ0VAM2 473 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 NONOQ15233 471 aaKnown RBP eCLIP3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 PTPN14Q15678 1187 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 TAB1Q15750 504 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 ZNF239Q16600 458 aaKnown RBP3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 MFSD4BQ5TF39 518 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 SPINK14Q6IE38 97 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 NOTUMQ6P988 496 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 FCRLAQ7L513 359 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 TLK2Q86UE8 772 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 MAML2Q8IZL2 1156 aaPredicted RBP3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 C11orf45Q8TAV5 145 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 MIPOL1Q8TD10 442 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 METTL21AQ8WXB1 218 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 PIK3R3Q92569 461 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 SPSB1Q96BD6 273 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 PGAP3Q96FM1 320 aaPredicted RBP3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 C2orf48Q96LS8 159 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 DNAJC4Q9NNZ3 241 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 NDE1Q9NXR1 346 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 WDR35Q9P2L0 1181 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 IGSF1Q8N6C5 1336 aa3.61□□□□□ -1.83
AC003001.1-201ENST00000443247 TRAV24A0A0B4J272 114 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 C2CD4DB7Z1M9 353 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 ACHEP22303 614 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 ALDH1B1P30837 517 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 TLX1P31314 330 aaPredicted RBP3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 RAD52P43351 418 aa3.6□□□□□ -1.83
AC003001.1-201ENST00000443247 OR3A2P47893 321 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms