RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 RASSF1Q9NS23 344 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 STON1Q9Y6Q2 735 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 DENRO43583 198 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 FAM20BO75063 409 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 CCNDBP1O95273 360 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 KLF8O95600 359 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 ADH1BP00325 375 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 GBAP04062 536 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 RPS3P23396 243 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 SLC6A11P48066 632 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 ERVPABLB-1P60509 514 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 EPS8Q12929 822 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 TMIGD1Q6UXZ0 262 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 DCUN1D3Q8IWE4 304 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 C11orf65Q8NCR3 313 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 OR2A12Q8NGT7 310 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 CHID1Q9BWS9 393 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 IL21Q9HBE4 155 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 EVA1BQ9NVM1 165 aa11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 CNOT6Q9ULM6 557 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-202ENST00000438773 UMPSP11172 480 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 MYCLP1P12525 358 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 PRDX3P30048 256 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 FOXA1P55317 472 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 EEFSECP57772 596 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 TRAP1Q12931 704 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 LRRC32Q14392 662 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 ABRAXAS2Q15018 415 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 CST6Q15828 149 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 GPAT3Q53EU6 434 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 TCEAL5Q5H9L2 206 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 ERICH5Q6P6B1 374 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 GALNT7Q86SF2 657 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 SETD9Q8NE22 299 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 REXO5Q96IC2 774 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 APOL4Q9BPW4 351 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 MARCH7Q9H992 704 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 GULP1Q9UBP9 304 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 PDE10AQ9Y233 779 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 SH3GLB1Q9Y371 365 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 ZNF780BQ9Y6R6 833 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 MPC1LP0DKB6 136 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 SLC7A1P30825 629 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 MEF2AQ02078 507 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 ZNF423Q2M1K9 1284 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 FAM78AQ5JUQ0 283 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 LIPIQ6XZB0 460 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 RFLNAQ6ZTI6 216 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 TMEM145Q8NBT3 493 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 GAB3Q8WWW8 586 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 CENPNQ96H22 339 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 SUCOQ9UBS9 1254 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 DMTF1Q9Y222 760 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 PARP14Q460N5 1801 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 BRWD1Q9NSI6 2320 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 PNMA8CA0A1B0GUJ8 204 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 A0A1W2PQU0 124 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 CXCR6O00574 342 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 ARPC2O15144 300 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 SCELO95171 688 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 NADKO95544 446 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 CHRM5P08912 532 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 STT3AP46977 705 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 ATP4BP51164 291 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 CCR8P51685 355 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 CASP9P55211 416 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 SHHQ15465 462 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 COL13A1Q5TAT6 717 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 C16orf62Q7Z3J2 963 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 EPB41L1Q9H4G0 881 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 AMBNQ9NP70 447 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 MRPS30Q9NP92 439 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 PNPLA3Q9NST1 481 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 EXD2Q9NVH0 621 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 TRPS1Q9UHF7 1281 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 PRSS21Q9Y6M0 314 aa11.22□□□□□ -0.61
TRAPPC9-202ENST00000438773 MICAL3Q7RTP6 2002 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 AQP12BA6NM10 295 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 RFXAPO00287 272 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 LSM1O15116 133 aaKnown RBP11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 AP1G1O43747 822 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 SLC28A2O43868 658 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 CACNG3O60359 315 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 TIMP2P16035 220 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 HSD17B2P37059 387 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 DEFA1P59665 94 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 DEFA3P59666 94 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 RPS13P62277 151 aaKnown RBP11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 HSPB3Q12988 150 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 LETMD1Q6P1Q0 360 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 PARS2Q7L3T8 475 aaKnown RBP11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 PARGQ86W56 976 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 FAM129CQ86XR2 697 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 AQP12AQ8IXF9 295 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 OR7A2PQ8NGA2 310 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 PHF10Q8WUB8 498 aaKnown RBP11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 TRIB3Q96RU7 358 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 TPK1Q9H3S4 243 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 PDFQ9HBH1 243 aa11.21□□□□□ -0.61
TRAPPC9-202ENST00000438773 FBXW2Q9UKT8 454 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms