RNA–Protein interactions for RNA: ENST00000436894.1

NCL-204, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-204ENST00000436894 MVDP53602 400 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 RIPPLY3P57055 190 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 UBASH3AP57075 661 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 MPP1Q00013 466 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 UBXN1Q04323 297 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 ENPEPQ07075 957 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.44□□□□□ -1.7
NCL-204ENST00000436894 TBX2Q13207 712 aaPredicted RBP4.44□□□□□ -1.7
NCL-204ENST00000436894 MTA1Q13330 715 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 CDH18Q13634 790 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 ALKBH1Q13686 389 aaKnown RBP4.44□□□□□ -1.7
NCL-204ENST00000436894 AP5B1Q2VPB7 878 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 KRT39Q6A163 491 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 TMEM88Q6PEY1 159 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 SLC30A9Q6PML9 568 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 ZNF474Q6S9Z5 364 aaPredicted RBP4.44□□□□□ -1.7
NCL-204ENST00000436894 SCARA5Q6ZMJ2 495 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 EFL1Q7Z2Z2 1120 aaKnown RBP4.44□□□□□ -1.7
NCL-204ENST00000436894 MAATS1Q7Z4T9 603 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 ABI3BPQ7Z7G0 1075 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 HORMAD1Q86X24 394 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 ZC3H3Q8IXZ2 948 aaKnown RBP4.44□□□□□ -1.7
NCL-204ENST00000436894 SCML4Q8N228 414 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 STK40Q8N2I9 435 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 BOLLQ8N9W6 283 aaKnown RBP4.44□□□□□ -1.7
NCL-204ENST00000436894 ANKRD52Q8NB46 1076 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 ST8SIA4Q92187 359 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 LMLNQ96KR4 655 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 CCDC114Q96M63 670 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.44□□□□□ -1.7
NCL-204ENST00000436894 CALN1Q9BXU9 219 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 TRIM2Q9C040 744 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 PAIP1Q9H074 479 aaKnown RBP4.44□□□□□ -1.7
NCL-204ENST00000436894 SDCBP2Q9H190 292 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 NDST4Q9H3R1 872 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 LRRC4Q9HBW1 653 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 CNGB3Q9NQW8 809 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 ARL15Q9NXU5 204 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 TAB2Q9NYJ8 693 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 LIMA1Q9UHB6 759 aaKnown RBP4.44□□□□□ -1.7
NCL-204ENST00000436894 ZNHIT2Q9UHR6 403 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 IPO11Q9UI26 975 aaKnown RBP4.44□□□□□ -1.7
NCL-204ENST00000436894 SLC25A13Q9UJS0 675 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 SLC13A4Q9UKG4 626 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 KIAA1257Q9ULG3 409 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 PKP3Q9Y446 797 aa4.44□□□□□ -1.7
NCL-204ENST00000436894 LY6G6EA0A0G2JKS1 128 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 SPTY2D1-AS1A0A0U1RR47 76 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 TCRBV7S3A2A0A539 114 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 SLC22A23A1A5C7 686 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 FAM90A7PA6NKC0 464 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 SAC3D1A6NKF1 404 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 FAM90A22PA8MWA6 464 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 FAM90A12PA8MX19 464 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 FAM90A23PA8MXZ1 464 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 XPO1O14980 1071 aaKnown RBP4.43□□□□□ -1.7
NCL-204ENST00000436894 MCF2LO15068 1137 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 SLC31A1O15431 190 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 P4HA2O15460 535 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 AQP9O43315 295 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 RTN2O75298 545 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 LUC7L3O95232 432 aaKnown RBP4.43□□□□□ -1.7
NCL-204ENST00000436894 IGLV3-27P01718 113 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 PKMP14618 531 aaKnown RBP4.43□□□□□ -1.7
NCL-204ENST00000436894 TYK2P29597 1187 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 CCKBRP32239 447 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 UGT1A5P35504 534 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 PGM1P36871 562 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 PIK3CAP42336 1068 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 RABIFP47224 123 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 FMO5P49326 533 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 PLK1P53350 603 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 CNTN1Q12860 1018 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 KRT31Q15323 416 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 CDKN3Q16667 212 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 GXYLT1Q4G148 440 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 FAM133BQ5BKY9 247 aaKnown RBP4.43□□□□□ -1.7
NCL-204ENST00000436894 LIPMQ5VYY2 423 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 BSPRYQ5W0U4 402 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 ARHGAP17Q68EM7 881 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 SUMO4Q6EEV6 95 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 KIAA1161Q6NSJ0 714 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 DENND1BQ6P3S1 775 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 FBXO42Q6P3S6 717 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 ZNF66Q6ZN08 573 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 GBP6Q6ZN66 633 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 Q6ZSR6 202 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.43□□□□□ -1.7
NCL-204ENST00000436894 PIGZQ86VD9 579 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 PARGQ86W56 976 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 SIX6OS1Q8N1H7 587 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 CARNMT1Q8N4J0 409 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 ENDOVQ8N8Q3 282 aaKnown RBP4.43□□□□□ -1.7
NCL-204ENST00000436894 FBXL13Q8NEE6 735 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 ZNF548Q8NEK5 533 aaPredicted RBP4.43□□□□□ -1.7
NCL-204ENST00000436894 IRGQQ8WZA9 623 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 ANP32BQ92688 251 aaKnown RBP4.43□□□□□ -1.7
NCL-204ENST00000436894 SLC35C1Q96A29 364 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 ZUFSPQ96AP4 578 aa4.43□□□□□ -1.7
NCL-204ENST00000436894 ZNF764Q96H86 408 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms