RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 TAS2R38P59533 333 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 ASIC1P78348 528 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 ARF5P84085 180 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 CNTN2Q02246 1040 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 KLRC3Q07444 240 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 BTG3Q14201 252 aaPredicted RBP3.93□□□□□ -1.78
HMGB3-203ENST00000430118 NONOQ15233 471 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB3-203ENST00000430118 EFNB3Q15768 340 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 EIF2S3LQ2VIR3 472 aaKnown RBP3.93□□□□□ -1.78
HMGB3-203ENST00000430118 CEP78Q5JTW2 689 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 TTC19Q6DKK2 380 aaPredicted RBP3.93□□□□□ -1.78
HMGB3-203ENST00000430118 DUS1LQ6P1R4 473 aaKnown RBP3.93□□□□□ -1.78
HMGB3-203ENST00000430118 FAM122CQ6P4D5 195 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 NOTUMQ6P988 496 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 BRAT1Q6PJG6 821 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 GBP6Q6ZN66 633 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 OTUD6AQ7L8S5 288 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 SPATA21Q7Z572 469 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 HOOK3Q86VS8 718 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 ADGRG3Q86Y34 549 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 GMCL1P1Q8NEA9 526 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 PSMA8Q8TAA3 256 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 MGARPQ8TDB4 240 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 NXNL1Q96CM4 212 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 ORAI1Q96D31 301 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 COQ8BQ96D53 544 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 DTNBP1Q96EV8 351 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 GRAMD2BQ96HH9 432 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 CABS1Q96KC9 395 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 OR6C1Q96RD1 312 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 INTS14Q96SY0 518 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 ATP6V0BQ99437 205 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 SEMA3CQ99985 751 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 MMADHCQ9H3L0 296 aaPredicted RBP3.93□□□□□ -1.78
HMGB3-203ENST00000430118 SEBOXQ9HB31 216 aaPredicted RBP3.93□□□□□ -1.78
HMGB3-203ENST00000430118 PCDH9Q9HC56 1237 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 TUFT1Q9NNX1 390 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 MID1IP1Q9NPA3 183 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 NRIP3Q9NQ35 241 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 BATF3Q9NR55 127 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 TMEM184CQ9NVA4 438 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 QPCTLQ9NXS2 382 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 TUBA8Q9NY65 449 aaPredicted RBP3.93□□□□□ -1.78
HMGB3-203ENST00000430118 CYP39A1Q9NYL5 469 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 NYAP2Q9P242 653 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 FBXL2Q9UKC9 423 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 CCPG1Q9ULG6 757 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.93□□□□□ -1.78
HMGB3-203ENST00000430118 PTPRSQ13332 1948 aa3.93□□□□□ -1.78
HMGB3-203ENST00000430118 KMT2BQ9UMN6 2715 aaPredicted RBP3.93□□□□□ -1.78
HMGB3-203ENST00000430118 NLRC5Q86WI3 1866 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 CKAP5Q14008 2032 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 SPTBN4Q9H254 2564 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 PKD1L2Q7Z442 2459 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 A0A0B4J293 547 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 IGHV4-28A0A0C4DH34 117 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 ANKUB1A6NFN9 424 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 C5orf52A6NGY3 159 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 TRIM77I1YAP6 450 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 INO80B-WBP1J3KQ70 363 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 ANKRD28O15084 1053 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 SLC16A5O15375 505 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 LINC01565O15544 149 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 ASAP2O43150 1006 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 PLPP2O43688 288 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 BUD23O43709 281 aaKnown RBP3.92□□□□□ -1.78
HMGB3-203ENST00000430118 ZIC3O60481 467 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 NEBLO76041 1014 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 EPN2O95208 641 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 GH1P01241 217 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 SNRNP70P08621 437 aaKnown RBP3.92□□□□□ -1.78
HMGB3-203ENST00000430118 FAM58BPP0C7Q3 252 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 OR2T7P0C7T2 308 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 PTPN3P26045 913 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 RPL3P39023 403 aaKnown RBP3.92□□□□□ -1.78
HMGB3-203ENST00000430118 SLC1A4P43007 532 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 SLC9A3P48764 834 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 ENTPD1P49961 510 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 KHKP50053 298 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 CLCNKAP51800 687 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 P2RX3P56373 397 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 PPP2R2BQ00005 443 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 CTTNQ14247 550 aaKnown RBP3.92□□□□□ -1.78
HMGB3-203ENST00000430118 TRIP6Q15654 476 aaKnown RBP3.92□□□□□ -1.78
HMGB3-203ENST00000430118 CTF1Q16619 201 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 AMZ1Q400G9 498 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 KLHL26Q53HC5 615 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 RAB6CQ53S08 254 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 EFHC1Q5JVL4 640 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 WLSQ5T9L3 541 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 RNASEH2BQ5TBB1 312 aaKnown RBP3.92□□□□□ -1.78
HMGB3-203ENST00000430118 HHATQ5VTY9 493 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 OTUD1Q5VV17 481 aaPredicted RBP3.92□□□□□ -1.78
HMGB3-203ENST00000430118 C18orf63Q68DL7 685 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 ALKBH5Q6P6C2 394 aaKnown RBP3.92□□□□□ -1.78
HMGB3-203ENST00000430118 B3GNT6Q6ZMB0 384 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGB3-203ENST00000430118 DBX2Q6ZNG2 339 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 CCDC73Q6ZRK6 1079 aa3.92□□□□□ -1.78
HMGB3-203ENST00000430118 CCDC80Q76M96 950 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms