RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 RPSAP08865 295 aaKnown RBP2.56□□□□□ -2
VPS41-206ENST00000418457 CLTAP09496 248 aa2.56□□□□□ -2
VPS41-206ENST00000418457 FAM228BP0C875 321 aa2.56□□□□□ -2
VPS41-206ENST00000418457 CSH1P0DML2 217 aa2.56□□□□□ -2
VPS41-206ENST00000418457 CSH2P0DML3 217 aa2.56□□□□□ -2
VPS41-206ENST00000418457 CDH1P12830 882 aa2.56□□□□□ -2
VPS41-206ENST00000418457 HLA-DOBP13765 273 aa2.56□□□□□ -2
VPS41-206ENST00000418457 CCNB1P14635 433 aa2.56□□□□□ -2
VPS41-206ENST00000418457 ACADSP16219 412 aa2.56□□□□□ -2
VPS41-206ENST00000418457 ITGA2P17301 1181 aa2.56□□□□□ -2
VPS41-206ENST00000418457 HOXB6P17509 224 aaKnown RBP2.56□□□□□ -2
VPS41-206ENST00000418457 POLR2CP19387 275 aaPredicted RBP2.56□□□□□ -2
VPS41-206ENST00000418457 TMOD1P28289 359 aa2.56□□□□□ -2
VPS41-206ENST00000418457 GCH1P30793 250 aa2.56□□□□□ -2
VPS41-206ENST00000418457 ALDH3A1P30838 453 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SLC18A1P54219 525 aa2.56□□□□□ -2
VPS41-206ENST00000418457 GAS1P54826 345 aa2.56□□□□□ -2
VPS41-206ENST00000418457 NAPAP54920 295 aa2.56□□□□□ -2
VPS41-206ENST00000418457 MFAP4P55083 255 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SNX16P57768 344 aa2.56□□□□□ -2
VPS41-206ENST00000418457 ERVFC1-1P60608 527 aa2.56□□□□□ -2
VPS41-206ENST00000418457 POLR2FP61218 127 aaKnown RBP2.56□□□□□ -2
VPS41-206ENST00000418457 ISL1P61371 349 aa2.56□□□□□ -2
VPS41-206ENST00000418457 NCALDP61601 193 aa2.56□□□□□ -2
VPS41-206ENST00000418457 EEF1A1P68104 462 aaKnown RBP2.56□□□□□ -2
VPS41-206ENST00000418457 GSTO1P78417 241 aa2.56□□□□□ -2
VPS41-206ENST00000418457 DR1Q01658 176 aa2.56□□□□□ -2
VPS41-206ENST00000418457 POU5F1Q01860 360 aaKnown RBP2.56□□□□□ -2
VPS41-206ENST00000418457 POU3F1Q03052 451 aaPredicted RBP2.56□□□□□ -2
VPS41-206ENST00000418457 BNIP1Q12981 228 aa2.56□□□□□ -2
VPS41-206ENST00000418457 CALCOCO2Q13137 446 aa2.56□□□□□ -2
VPS41-206ENST00000418457 EXOC3L4Q17RC7 722 aa2.56□□□□□ -2
VPS41-206ENST00000418457 LETM2Q2VYF4 491 aa2.56□□□□□ -2
VPS41-206ENST00000418457 TMEM35AQ53FP2 167 aa2.56□□□□□ -2
VPS41-206ENST00000418457 KRTCAP3Q53RY4 240 aa2.56□□□□□ -2
VPS41-206ENST00000418457 TNFAIP8L3Q5GJ75 292 aa2.56□□□□□ -2
VPS41-206ENST00000418457 RAB41Q5JT25 222 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SEL1L2Q5TEA6 688 aa2.56□□□□□ -2
VPS41-206ENST00000418457 EEF1A1P5Q5VTE0 462 aa2.56□□□□□ -2
VPS41-206ENST00000418457 DUPD1Q68J44 220 aa2.56□□□□□ -2
VPS41-206ENST00000418457 LCN10Q6JVE6 187 aa2.56□□□□□ -2
VPS41-206ENST00000418457 C11orf63Q6NUN7 778 aa2.56□□□□□ -2
VPS41-206ENST00000418457 IRGCQ6NXR0 463 aa2.56□□□□□ -2
VPS41-206ENST00000418457 CFAP161Q6P656 301 aa2.56□□□□□ -2
VPS41-206ENST00000418457 ALKBH5Q6P6C2 394 aaKnown RBP2.56□□□□□ -2
VPS41-206ENST00000418457 MOXD1Q6UVY6 613 aa2.56□□□□□ -2
VPS41-206ENST00000418457 GFRALQ6UXV0 394 aa2.56□□□□□ -2
VPS41-206ENST00000418457 PPP1R21Q6ZMI0 780 aa2.56□□□□□ -2
VPS41-206ENST00000418457 INTS8Q75QN2 995 aaKnown RBP2.56□□□□□ -2
VPS41-206ENST00000418457 BRINP3Q76B58 766 aa2.56□□□□□ -2
VPS41-206ENST00000418457 ASRGL1Q7L266 308 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SPATA21Q7Z572 469 aa2.56□□□□□ -2
VPS41-206ENST00000418457 NT5DC3Q86UY8 548 aa2.56□□□□□ -2
VPS41-206ENST00000418457 EXOC3L1Q86VI1 746 aa2.56□□□□□ -2
VPS41-206ENST00000418457 TMPRSS12Q86WS5 348 aa2.56□□□□□ -2
VPS41-206ENST00000418457 TMEM219Q86XT9 240 aa2.56□□□□□ -2
VPS41-206ENST00000418457 KMT5CQ86Y97 462 aa2.56□□□□□ -2
VPS41-206ENST00000418457 MAP7D3Q8IWC1 876 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.56□□□□□ -2
VPS41-206ENST00000418457 PM20D2Q8IYS1 436 aa2.56□□□□□ -2
VPS41-206ENST00000418457 LRRC34Q8IZ02 419 aa2.56□□□□□ -2
VPS41-206ENST00000418457 ARHGAP18Q8N392 663 aa2.56□□□□□ -2
VPS41-206ENST00000418457 NME8Q8N427 588 aa2.56□□□□□ -2
VPS41-206ENST00000418457 METTL13Q8N6R0 699 aa2.56□□□□□ -2
VPS41-206ENST00000418457 ANKRD13CQ8N6S4 541 aa2.56□□□□□ -2
VPS41-206ENST00000418457 EMC1Q8N766 993 aa2.56□□□□□ -2
VPS41-206ENST00000418457 FAM133AQ8N9E0 248 aa2.56□□□□□ -2
VPS41-206ENST00000418457 BBOF1Q8ND07 529 aa2.56□□□□□ -2
VPS41-206ENST00000418457 BBS10Q8TAM1 723 aa2.56□□□□□ -2
VPS41-206ENST00000418457 GSDMBQ8TAX9 411 aa2.56□□□□□ -2
VPS41-206ENST00000418457 LNX1Q8TBB1 728 aaPredicted RBP2.56□□□□□ -2
VPS41-206ENST00000418457 TBC1D16Q8TBP0 767 aa2.56□□□□□ -2
VPS41-206ENST00000418457 GRK7Q8WTQ7 553 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SDR42E1Q8WUS8 393 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SLC38A5Q8WUX1 472 aa2.56□□□□□ -2
VPS41-206ENST00000418457 DYDC1Q8WWB3 177 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SLC44A1Q8WWI5 657 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SORCS1Q8WY21 1168 aa2.56□□□□□ -2
VPS41-206ENST00000418457 CTNNBL1Q8WYA6 563 aaPredicted RBP2.56□□□□□ -2
VPS41-206ENST00000418457 SLCO2A1Q92959 643 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SAT2Q96F10 170 aaPredicted RBP2.56□□□□□ -2
VPS41-206ENST00000418457 STAMBPL1Q96FJ0 436 aa2.56□□□□□ -2
VPS41-206ENST00000418457 NAF1Q96HR8 494 aaKnown RBP2.56□□□□□ -2
VPS41-206ENST00000418457 MAGEB18Q96M61 343 aa2.56□□□□□ -2
VPS41-206ENST00000418457 MTMR9Q96QG7 549 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SMC6Q96SB8 1091 aa2.56□□□□□ -2
VPS41-206ENST00000418457 TSC22D3Q99576 134 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SELENOSQ9BQE4 189 aa2.56□□□□□ -2
VPS41-206ENST00000418457 CCDC77Q9BR77 488 aa2.56□□□□□ -2
VPS41-206ENST00000418457 ERP44Q9BS26 406 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SYT17Q9BSW7 474 aa2.56□□□□□ -2
VPS41-206ENST00000418457 FAM192AQ9GZU8 254 aa2.56□□□□□ -2
VPS41-206ENST00000418457 GANQ9H2C0 597 aa2.56□□□□□ -2
VPS41-206ENST00000418457 CCDC68Q9H2F9 335 aa2.56□□□□□ -2
VPS41-206ENST00000418457 ECT2Q9H8V3 914 aa2.56□□□□□ -2
VPS41-206ENST00000418457 LRRC4Q9HBW1 653 aa2.56□□□□□ -2
VPS41-206ENST00000418457 ZDHHC18Q9NUE0 388 aa2.56□□□□□ -2
VPS41-206ENST00000418457 NKIRAS1Q9NYS0 192 aa2.56□□□□□ -2
VPS41-206ENST00000418457 WWOXQ9NZC7 414 aa2.56□□□□□ -2
VPS41-206ENST00000418457 LARSQ9P2J5 1176 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms