RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 KCNC4Q03721 635 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 OCA2Q04671 838 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 CBLBQ13191 982 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 NKG7Q16617 165 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 PRTGQ2VWP7 1150 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 PRAMEF13Q5VWM6 474 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 AGTRAPQ6RW13 159 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 STRA8Q7Z7C7 330 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 SLC26A11Q86WA9 606 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 CLEC1AQ8NC01 280 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 NACC2Q96BF6 587 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 ALKBH8Q96BT7 664 aaKnown RBP14.62□□□□□ -0.07
NUP50-204ENST00000417702 PRAP1Q96NZ9 151 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 OR2A5Q96R48 311 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 ATG10Q9H0Y0 220 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 EPN3Q9H201 632 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 MLXIPLQ9NP71 852 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 TMEM184CQ9NVA4 438 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 P4HTMQ9NXG6 502 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 GPR83Q9NYM4 423 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 PCDHGB7Q9Y5F8 929 aa14.62□□□□□ -0.07
NUP50-204ENST00000417702 RP1L1Q8IWN7 2480 aaPredicted RBP14.61□□□□□ -0.07
NUP50-204ENST00000417702 HAT1O14929 419 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 EIF3HO15372 352 aaKnown RBP eCLIP14.61□□□□□ -0.07
NUP50-204ENST00000417702 PRPF4O43172 522 aaKnown RBP eCLIP14.61□□□□□ -0.074e-7■■■■□ 23.9
NUP50-204ENST00000417702 KLHL41O60662 606 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 TSPAN12O95859 305 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 PDGFAP04085 211 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 SAT1P21673 171 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 MMP11P24347 488 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 AP1S2P56377 157 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 FOXL2P58012 376 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 ILF2Q12905 390 aaKnown RBP14.61□□□□□ -0.07
NUP50-204ENST00000417702 NAE1Q13564 534 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 PHKG1Q16816 387 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 DCAF10Q5QP82 559 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 GARNL3Q5VVW2 1013 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 DUPD1Q68J44 220 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 CAPN13Q6MZZ7 669 aaPredicted RBP14.61□□□□□ -0.07
NUP50-204ENST00000417702 MBOAT1Q6ZNC8 495 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 CAPN12Q6ZSI9 719 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 COX15Q7KZN9 410 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 PPP1R32Q7Z5V6 425 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 ZC3HC1Q86WB0 502 aaKnown RBP14.61□□□□□ -0.07
NUP50-204ENST00000417702 C17orf64Q86WR6 236 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 FDCSPQ8NFU4 85 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 CDKL2Q92772 493 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 MVB12AQ96EY5 273 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 VPS50Q96JG6 964 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 OLFM1Q99784 485 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 RAB17Q9H0T7 212 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 CLMPQ9H6B4 373 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 SAYSD1Q9NPB0 183 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 CUEDC1Q9NWM3 386 aaPredicted RBP14.61□□□□□ -0.07
NUP50-204ENST00000417702 ARL15Q9NXU5 204 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 CTSFQ9UBX1 484 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 ZNF282Q9UDV7 671 aaPredicted RBP14.61□□□□□ -0.07
NUP50-204ENST00000417702 RUVBL1Q9Y265 456 aaKnown RBP14.61□□□□□ -0.07
NUP50-204ENST00000417702 PSAT1Q9Y617 370 aa14.61□□□□□ -0.07
NUP50-204ENST00000417702 FAM95CA0A1B0GW59 222 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 MED26O95402 600 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 ANXA5P08758 320 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 ENO2P09104 434 aaPredicted RBP14.6□□□□□ -0.07
NUP50-204ENST00000417702 FBLP22087 321 aaKnown RBP14.6□□□□□ -0.07
NUP50-204ENST00000417702 RPS15AP62244 130 aaKnown RBP14.6□□□□□ -0.07
NUP50-204ENST00000417702 CAV1Q03135 178 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 NDUFA9Q16795 377 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 WHAMMP3Q1A5X7 153 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 HKDC1Q2TB90 917 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 ZNF572Q7Z3I7 529 aaPredicted RBP14.6□□□□□ -0.07
NUP50-204ENST00000417702 HPS6Q86YV9 775 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 PLD3Q8IV08 490 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 DTWD1Q8N5C7 304 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 NKAPQ8N5F7 415 aaKnown RBP14.6□□□□□ -0.07
NUP50-204ENST00000417702 KIF18AQ8NI77 898 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 ATL1Q8WXF7 558 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 MIEF2Q96C03 454 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 THAP11Q96EK4 314 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 PDLIM5Q96HC4 596 aaKnown RBP14.6□□□□□ -0.07
NUP50-204ENST00000417702 VPS39Q96JC1 886 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 C10orf90Q96M02 699 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 SPSB2Q99619 263 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 HAUS8Q9BT25 410 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 SOX17Q9H6I2 414 aaPredicted RBP14.6□□□□□ -0.07
NUP50-204ENST00000417702 ATP13A2Q9NQ11 1180 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 SEMA3GQ9NS98 782 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 TXNDC16Q9P2K2 825 aa14.6□□□□□ -0.07
NUP50-204ENST00000417702 MDC1Q14676 2089 aaKnown RBP14.6□□□□□ -0.07
NUP50-204ENST00000417702 VSTM2BA6NLU5 285 aa14.59□□□□□ -0.07
NUP50-204ENST00000417702 AGPSO00116 658 aa14.59□□□□□ -0.07
NUP50-204ENST00000417702 DPM1O60762 260 aa14.59□□□□□ -0.07
NUP50-204ENST00000417702 ZNF37AP17032 561 aaPredicted RBP14.59□□□□□ -0.07
NUP50-204ENST00000417702 GRK3P35626 688 aa14.59□□□□□ -0.07
NUP50-204ENST00000417702 PGGT1BP53609 377 aa14.59□□□□□ -0.07
NUP50-204ENST00000417702 SLC12A2P55011 1212 aa14.59□□□□□ -0.07
NUP50-204ENST00000417702 PLTPP55058 493 aa14.59□□□□□ -0.07
NUP50-204ENST00000417702 RBBP7Q16576 425 aa14.59□□□□□ -0.07
NUP50-204ENST00000417702 COLEC12Q5KU26 742 aa14.59□□□□□ -0.07
NUP50-204ENST00000417702 VWA5B1Q5TIE3 1220 aa14.59□□□□□ -0.07
NUP50-204ENST00000417702 LCTLQ6UWM7 567 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms