RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 HADHAP40939 763 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 HSPA7P48741 367 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 PDX1P52945 283 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 CSE1LP55060 971 aaKnown RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 CTXN1P60606 82 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 B4GALNT1Q00973 533 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 PDE1BQ01064 536 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 C2orf54Q08AI8 447 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 ILKQ13418 452 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 TOP3AQ13472 1001 aaPredicted RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 PMS2P11Q13670 270 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 SEMA3AQ14563 771 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 KCNJ11Q14654 390 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 PPP1R7Q15435 360 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 CYP1B1Q16678 543 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 LDLRAP1Q5SW96 308 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 TSTD2Q5T7W7 516 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 ZDHHC20Q5W0Z9 365 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 PAPD7Q5XG87 772 aaKnown RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 TLDC1Q6P9B6 456 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 LVRNQ6Q4G3 990 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 SYT10Q6XYQ8 523 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 RBM44Q6ZP01 1051 aaKnown RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 LARP4Q71RC2 724 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS41-205ENST00000414632 ZNF534Q76KX8 674 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 TMPRSS9Q7Z410 1059 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 SNX20Q7Z614 316 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 SPRED1Q7Z699 444 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 TMPRSS12Q86WS5 348 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 FAM90A1Q86YD7 464 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 IGDCC3Q8IVU1 814 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 PIANPQ8IYJ0 282 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 GALNT15Q8N3T1 639 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 CLDN19Q8N6F1 224 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 OTUD6BQ8N6M0 293 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 DDHD1Q8NEL9 900 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 OR13J1Q8NGT2 312 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 GPR150Q8NGU9 434 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 BRIX1Q8TDN6 353 aaKnown RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 ZCCHC14Q8WYQ9 949 aaKnown RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 CPT1BQ92523 772 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 NAT6Q93015 286 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 ZBTB8AQ96BR9 441 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 DCUN1D1Q96GG9 259 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 CDKN2AIPNLQ96HQ2 116 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 GFM1Q96RP9 751 aaKnown RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 NAP1L3Q99457 506 aaPredicted RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 NUDT22Q9BRQ3 303 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 TRIM51Q9BSJ1 452 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 TBC1D10AQ9BXI6 508 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 LRRN3Q9H3W5 708 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 RMI1Q9H9A7 625 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 EPB41L5Q9HCM4 733 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 CHRAC1Q9NRG0 131 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 HOMER3Q9NSC5 361 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 SACM1LQ9NTJ5 587 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 TMEM140Q9NV12 185 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 SMOXQ9NWM0 555 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 TMEM9Q9P0T7 183 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 MARCH4Q9P2E8 410 aaPredicted RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 ASIC3Q9UHC3 531 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 APPL1Q9UKG1 709 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 SATB2Q9UPW6 733 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 WDR37Q9Y2I8 494 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 TCAF1Q9Y4C2 921 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 SAR1BQ9Y6B6 198 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 PRSS21Q9Y6M0 314 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 SNRNP200O75643 2136 aaKnown RBP4.76□□□□□ -1.65
VPS41-205ENST00000414632 CFAP47Q6ZTR5 3102 aa4.76□□□□□ -1.65
VPS41-205ENST00000414632 MYOCOSA0A1B0GUC4 107 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 A0A1W2PNU3 283 aaPredicted RBP4.75□□□□□ -1.65
VPS41-205ENST00000414632 HEATR9A2RTY3 570 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 A6NCN8 305 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 MROH6A6NGR9 719 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 A8MU76 341 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 D6RAR5 112 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 TTI1O43156 1089 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 OR1I1O60431 355 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 PPFIA2O75334 1257 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 F3P13726 295 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 TCP1P17987 556 aaKnown RBP4.75□□□□□ -1.65
VPS41-205ENST00000414632 TPSB2P20231 275 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 FPR1P21462 350 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 IDSP22304 550 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 ADRA1DP25100 572 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 CASQ1P31415 396 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 CSF2RBP32927 897 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 DEKP35659 375 aaKnown RBP4.75□□□□□ -1.65
VPS41-205ENST00000414632 ETV4P43268 484 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 KIR2DL3P43628 341 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 CCT5P48643 541 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 FNTAP49354 379 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 MEOX1P50221 254 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 CLCNKAP51800 687 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 ARFIP2P53365 341 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 PRAMEP78395 509 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 E2F1Q01094 437 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 HHEXQ03014 270 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 CACNG1Q06432 222 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 LRP8Q14114 963 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms