RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 PPP3R2Q96LZ3 170 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 ZNF382Q96SR6 550 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 MARVELD1Q9BSK0 173 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 TTPALQ9BTX7 342 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 BARHL1Q9BZE3 327 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 IKZF5Q9H5V7 419 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 FOLH1BQ9HBA9 442 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 ARNT2Q9HBZ2 717 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 EXOSC4Q9NPD3 245 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 CUEDC1Q9NWM3 386 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 SRCAPQ6ZRS2 3230 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 IGKV6-21A0A0C4DH24 114 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 FAM240BA0A1B0GVZ2 78 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 H0YC42 278 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 KLK8O60259 260 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 PMPCBO75439 489 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 SCG5P05408 212 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 SLC2A3P11169 496 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 KELP23276 732 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 GPC1P35052 558 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 TPMTP51580 245 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 PITX1P78337 314 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 ABHD18Q0P651 414 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 SCRN3Q0VDG4 424 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 NR6A1Q15406 480 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 STXBP2Q15833 593 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 CRYBG2Q8N1P7 616 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 CLDN22Q8N7P3 220 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 ZBTB44Q8NCP5 570 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 SLC16A10Q8TF71 515 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 AP3S1Q92572 193 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 MSLNLQ96KJ4 702 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 SAMD11Q96NU1 681 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 NECTIN4Q96NY8 510 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 QRFPRQ96P65 431 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 PCYT2Q99447 389 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 MYOCQ99972 504 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 NFKBIZQ9BYH8 718 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 SIK2Q9H0K1 926 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 ZNF408Q9H9D4 720 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 FAM105AQ9NUU6 356 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 EVA1BQ9NVM1 165 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 SLC25A37Q9NYZ2 338 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 ACSL5Q9ULC5 683 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 PCDHGB7Q9Y5F8 929 aa5.67□□□□□ -1.5
R3HDM1-202ENST00000409478 SH3D21A4FU49 640 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 MATN3O15232 486 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 FZD6O60353 706 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 ECI2O75521 394 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 VIPP01282 170 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 SEMG1P04279 462 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 SLC2A2P11168 524 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 PRDX3P30048 256 aaKnown RBP5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 HLA-FP30511 346 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 GNA13Q14344 377 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 DMC1Q14565 340 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 FAM187BQ17R55 369 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 FAM174BQ3ZCQ3 159 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 FAM171A1Q5VUB5 890 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 MRNIPQ6NTE8 343 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 GPR153Q6NV75 609 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 KDELC1Q6UW63 502 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 MSRB3Q8IXL7 192 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 PLPP6Q8IY26 295 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 LRRC71Q8N4P6 559 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 LRRC17Q8N6Y2 441 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 SLC37A3Q8NCC5 494 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 HERVK_113Q902F9 699 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 SLC25A46Q96AG3 418 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 CREB3L1Q96BA8 519 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 KIF12Q96FN5 646 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 PDXPQ96GD0 296 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 EXOC2Q96KP1 924 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 OPALINQ96PE5 141 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 MCOLN1Q9GZU1 580 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 CCSER2Q9H7U1 834 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 IFT46Q9NQC8 304 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 SNTG1Q9NSN8 517 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 ZNF225Q9UK10 706 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 GMEB2Q9UKD1 530 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 CRYL1Q9Y2S2 319 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 TRIP11Q15643 1979 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 KIAA1217Q5T5P2 1943 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 CIB4A0PJX0 185 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 FAM170BA6NMN3 283 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 SMLR1H3BR10 107 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 MPZL2O60487 215 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 IL1AP01583 271 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 HMBSP08397 361 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 NPR3P17342 541 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 WARSP23381 471 aaKnown RBP5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 PTX3P26022 381 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 PTBP1P26599 531 aaKnown RBP eCLIP5.66□□□□□ -1.55e-8■■■■■ 40.5
R3HDM1-202ENST00000409478 GZMMP51124 257 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 UBE3AQ05086 875 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 POU4F3Q15319 338 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 TSNQ15631 228 aaKnown RBP5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 AP5B1Q2VPB7 878 aa5.66□□□□□ -1.5
R3HDM1-202ENST00000409478 IL27RAQ6UWB1 636 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms