RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 SPASTQ9UBP0 616 aa13.56□□□□□ -0.24
APOB-202ENST00000399256 TRPS1Q9UHF7 1281 aa13.56□□□□□ -0.24
APOB-202ENST00000399256 PRSS21Q9Y6M0 314 aa13.56□□□□□ -0.24
APOB-202ENST00000399256 F5H5T6 163 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 FPGTO14772 594 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 WDR47O94967 919 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 EBLN1P0CF75 366 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 SDC1P18827 310 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 MAGEA11P43364 429 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 MAP2K5Q13163 448 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 TUSC3Q13454 348 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 TTLL9Q3SXZ7 439 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 SERPINA11Q86U17 422 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 GALNT12Q8IXK2 581 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 BEND7Q8N7W2 519 aaPredicted RBP13.55□□□□□ -0.24
APOB-202ENST00000399256 POP5Q969H6 163 aaKnown RBP13.55□□□□□ -0.24
APOB-202ENST00000399256 CEP295NLQ96MC4 621 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 TMEM246Q9BRR3 403 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 EBPLQ9BY08 206 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 CLPBQ9H078 707 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 TMEM184CQ9NVA4 438 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 BTBD3Q9Y2F9 522 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 PNMA8CA0A1B0GUJ8 204 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 CENPXA8MT69 81 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 AGRPO00253 132 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 CBX4O00257 560 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 GFRA2O00451 464 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 CA12O43570 354 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 SLC25A14O95258 325 aaPredicted RBP13.55□□□□□ -0.24
APOB-202ENST00000399256 CPSF4O95639 269 aaKnown RBP13.55□□□□□ -0.24
APOB-202ENST00000399256 CTPS1P17812 591 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 CR2P20023 1033 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 SLC6A4P31645 630 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 SOX6P35712 828 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 GGT2P36268 569 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 RGS4P49798 205 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 CSNK2BP67870 215 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 ZXDBP98169 803 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 PPP2R2DQ66LE6 453 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 EIF3MQ7L2H7 374 aaKnown RBP13.55□□□□□ -0.24
APOB-202ENST00000399256 CCDC190Q86UF4 302 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 PTOV1Q86YD1 416 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 ATAD1Q8NBU5 361 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 NELL1Q92832 810 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 SNX18Q96RF0 628 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 CCSER2Q9H7U1 834 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 TAS2R9Q9NYW1 312 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 ZFP37Q9Y6Q3 630 aaPredicted RBP13.55□□□□□ -0.24
APOB-202ENST00000399256 CENPBD1B2RD01 187 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 TNFRSF10AO00220 468 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 SCO2O43819 266 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 PSMA3P25788 255 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 RPS24P62847 133 aaKnown RBP13.55□□□□□ -0.24
APOB-202ENST00000399256 ST3GAL4Q11206 333 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 TWF1Q12792 350 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 FOXD4Q12950 439 aaPredicted RBP13.55□□□□□ -0.24
APOB-202ENST00000399256 TAF10Q12962 218 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 CDK10Q15131 360 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 SNAP47Q5SQN1 464 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 MFSD4BQ5TF39 518 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 CBLL1Q75N03 491 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 ZSWIM9Q86XI8 627 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 STK40Q8N2I9 435 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 CDC26Q8NHZ8 85 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 UTP15Q8TED0 518 aaKnown RBP13.55□□□□□ -0.24
APOB-202ENST00000399256 PIK3R3Q92569 461 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 APIPQ96GX9 242 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 ST6GAL2Q96JF0 529 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 APOLD1Q96LR9 279 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 FEVQ99581 238 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 NTMT1Q9BV86 223 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 GABARAPL3Q9BY60 117 aa13.55□□□□□ -0.24
APOB-202ENST00000399256 SCAMP3O14828 347 aaKnown RBP13.54□□□□□ -0.24
APOB-202ENST00000399256 CLDN9O95484 217 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 KRT6AP02538 564 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 KRT6BP04259 564 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 NUDT7P0C024 238 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 CHRNB1P11230 501 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 CD52P31358 61 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 KRT6CP48668 564 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 ARPC4P59998 168 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 CACNG1Q06432 222 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 IRF3Q14653 427 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 LINGO4Q6UY18 593 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 ZNF517Q6ZMY9 492 aaPredicted RBP13.54□□□□□ -0.24
APOB-202ENST00000399256 SERPINA9Q86WD7 417 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 RNF175Q8N4F7 328 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 OR7G1Q8NGA0 311 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 OR52J3Q8NH60 311 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 EID2BQ96D98 161 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 OR2A14Q96R47 310 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 SLC30A2Q9BRI3 323 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 ADGRE3Q9BY15 652 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 LATS2Q9NRM7 1088 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 NPAP1Q9NZP6 1156 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 CEP350Q5VT06 3117 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 TFECO14948 347 aaPredicted RBP13.54□□□□□ -0.24
APOB-202ENST00000399256 RGS5O15539 181 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 AOC2O75106 756 aa13.54□□□□□ -0.24
APOB-202ENST00000399256 SEMA3DO95025 777 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms