RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CSTF2P33240 577 aaKnown RBP eCLIP2.47□□□□□ -2.01
CD47-203ENST00000398258 CASP3P42574 277 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 SULT2A1Q06520 285 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 ARHGAP1Q07960 439 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 HERC3Q15034 1050 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 UGP2Q16851 508 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 ZNF674Q2M3X9 581 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 SMU1Q2TAY7 513 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 KBTBD12Q3ZCT8 623 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 ODF2Q5BJF6 829 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 C20orf194Q5TEA3 1177 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 SLC35E4Q6ICL7 350 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 ZNF770Q6IQ21 691 aaPredicted RBP2.47□□□□□ -2.01
CD47-203ENST00000398258 PRSS55Q6UWB4 352 aaPredicted RBP2.47□□□□□ -2.01
CD47-203ENST00000398258 TRPT1Q86TN4 253 aaKnown RBP2.47□□□□□ -2.01
CD47-203ENST00000398258 RTN4RL2Q86UN3 420 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 PIGZQ86VD9 579 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 AMIGO1Q86WK6 493 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 SNX32Q86XE0 403 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 CREBRFQ8IUR6 639 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 CCDC60Q8IWA6 550 aaPredicted RBP2.47□□□□□ -2.01
CD47-203ENST00000398258 TUSC5Q8IXB3 177 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 KLHL7Q8IXQ5 586 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 CCDC170Q8IYT3 715 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 TMCO5AQ8N6Q1 288 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 UXS1Q8NBZ7 420 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 LRRC8CQ8TDW0 803 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 HPSE2Q8WWQ2 592 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 SGF29Q96ES7 293 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 STAMBPL1Q96FJ0 436 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 PDLIM5Q96HC4 596 aaKnown RBP2.47□□□□□ -2.01
CD47-203ENST00000398258 SENP5Q96HI0 755 aaPredicted RBP2.47□□□□□ -2.01
CD47-203ENST00000398258 ATG101Q9BSB4 218 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 RHNO1Q9BSD3 238 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 UTP14AQ9BVJ6 771 aaKnown RBP2.47□□□□□ -2.01
CD47-203ENST00000398258 MRPL9Q9BYD2 267 aaKnown RBP2.47□□□□□ -2.01
CD47-203ENST00000398258 PITPNM3Q9BZ71 974 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 PRRG4Q9BZD6 226 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 SDCBP2Q9H190 292 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 CHST11Q9NPF2 352 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 ECHDC1Q9NTX5 307 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.47□□□□□ -2.01
CD47-203ENST00000398258 SEPT10Q9P0V9 454 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 ZNF624Q9P2J8 865 aaPredicted RBP2.47□□□□□ -2.01
CD47-203ENST00000398258 MTRRQ9UBK8 725 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 GRID1Q9ULK0 1009 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 FAF1Q9UNN5 650 aaPredicted RBP2.47□□□□□ -2.01
CD47-203ENST00000398258 GPR132Q9UNW8 380 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 SMCHD1A6NHR9 2005 aa2.47□□□□□ -2.01
CD47-203ENST00000398258 SNED1Q8TER0 1413 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 TRBV5-5A0A0J9YX44 114 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 MSGN1A6NI15 193 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 C17orf105B2RV13 164 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 TMEM150CB9EJG8 249 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 KBTBD13C9JR72 458 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 NPIPA3F8WFD2 350 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 ZNF263O14978 683 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 FGF17O60258 216 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 RTN2O75298 545 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 SLC22A3O75751 556 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 CDK2AP2O75956 126 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 CLPTM1O96005 669 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 MOCS2O96007 188 aaPredicted RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 GH1P01241 217 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 SERPING1P05155 500 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 GPIP06744 558 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 ANKRD34CP0C6C1 535 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 ITIH1P19827 911 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 CEACAM8P31997 349 aaPredicted RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 OR3A1P47881 315 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 KCNJ1P48048 391 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 ADARP55265 1226 aaKnown RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 CDH11P55287 796 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 ST8SIA6P61647 398 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 PHEXP78562 749 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 C17orf67Q0P5P2 114 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 TRAP1Q12931 704 aaKnown RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 GPR17Q13304 367 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 CDC37Q16543 378 aaPredicted RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 RBBP7Q16576 425 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 GPR33Q49SQ1 333 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.46□□□□□ -2.02
CD47-203ENST00000398258 KLHL10Q6JEL2 608 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 UGT3A1Q6NUS8 523 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 CASC4Q6P4E1 433 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 RBMS3Q6XE24 437 aaKnown RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 MARK2Q7KZI7 788 aaKnown RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 SLC26A9Q7LBE3 791 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 TRMT1LQ7Z2T5 733 aaKnown RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 CPEB2Q7Z5Q1 589 aaKnown RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 MEX3DQ86XN8 651 aaKnown RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 DCUN1D3Q8IWE4 304 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 SYCP3Q8IZU3 236 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 CLYBLQ8N0X4 340 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 EID3Q8N140 333 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 C10orf53Q8N6V4 93 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 ZNF383Q8NA42 475 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 MSANTD4Q8NCY6 345 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms