RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PHF10Q8WUB8 498 aaKnown RBP18.27■□□□□ 0.51
CBX1-202ENST00000393408 ASIC4Q96FT7 647 aa18.27■□□□□ 0.51
CBX1-202ENST00000393408 PITX2Q99697 317 aa18.27■□□□□ 0.51
CBX1-202ENST00000393408 TSEN34Q9BSV6 310 aaKnown RBP18.27■□□□□ 0.51
CBX1-202ENST00000393408 TMEM247A6NEH6 219 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 MAGEB17A8MXT2 336 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 PRMT3O60678 531 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 MPC1LP0DKB6 136 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 ITPKAP23677 461 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 KRT20P35900 424 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 ITGA1P56199 1179 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 RPS3AP61247 264 aaKnown RBP18.26■□□□□ 0.51
CBX1-202ENST00000393408 NCS1P62166 190 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 PTSQ03393 145 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 LMAN2Q12907 356 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 TMEM236Q5W0B7 351 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 FAHD1Q6P587 224 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 ZNF621Q6ZSS3 439 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 FAM43BQ6ZT52 329 aaPredicted RBP18.26■□□□□ 0.51
CBX1-202ENST00000393408 OR2AP1Q8NGE2 309 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 SCRN2Q96FV2 425 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 SIGLEC11Q96RL6 698 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 P2RY13Q9BPV8 354 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 ABCB8Q9NUT2 735 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 SIRT5Q9NXA8 310 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 KIAA1671Q9BY89 1806 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 OBSL1O75147 1896 aa18.26■□□□□ 0.51
CBX1-202ENST00000393408 KRT87PA6NCN2 255 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 E9PQ18 207 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 JUPP14923 745 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 GRK3P35626 688 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 HALP42357 657 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 INAQ16352 499 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 PAGE2BQ5JRK9 111 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 TPGS2Q68CL5 300 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 PRSS48Q7RTY5 328 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 ADCK1Q86TW2 530 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 MINDY2Q8NBR6 621 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 DPH2Q9BQC3 489 aaPredicted RBP18.25■□□□□ 0.51
CBX1-202ENST00000393408 KIF17Q9P2E2 1029 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 GFYI3L273 518 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 WBP4O75554 376 aaKnown RBP18.25■□□□□ 0.51
CBX1-202ENST00000393408 FKBP9O95302 570 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 LHCGRP22888 699 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 CHIT1Q13231 466 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 IQCCQ4KMZ1 466 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 TXNDC8Q6A555 127 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 SNX29P2Q8IUI4 249 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 CLECL1Q8IZS7 167 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 ATG16L2Q8NAA4 619 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 OR8J2Q8NGG1 315 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 UBE2FQ969M7 185 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 ASPSCR1Q9BZE9 553 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 REEP1Q9H902 201 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 ZNF334Q9HCZ1 680 aaPredicted RBP18.25■□□□□ 0.51
CBX1-202ENST00000393408 ATAD3AQ9NVI7 634 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 FAM120CQ9NX05 1096 aaKnown RBP18.25■□□□□ 0.51
CBX1-202ENST00000393408 THUMPD1Q9NXG2 353 aaKnown RBP18.25■□□□□ 0.51
CBX1-202ENST00000393408 GIN1Q9NXP7 522 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 TMPRSS11EQ9UL52 423 aa18.25■□□□□ 0.51
CBX1-202ENST00000393408 UPK3BL1B0FP48 263 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 UPK3BL2E5RIL1 263 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 OLFM2O95897 454 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 EFNA1P20827 205 aaPredicted RBP18.24■□□□□ 0.51
CBX1-202ENST00000393408 CD70P32970 193 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 SP140Q13342 867 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 HIST2H2ACQ16777 129 aaPredicted RBP18.24■□□□□ 0.51
CBX1-202ENST00000393408 PROX2Q3B8N5 592 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 ECHDC3Q96DC8 303 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 IGSF21Q96ID5 467 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 PPIL1Q9Y3C6 166 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 OR2A25A4D2G3 310 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 PABPN1LA6NDY0 278 aaKnown RBP18.24■□□□□ 0.51
CBX1-202ENST00000393408 SLC16A5O15375 505 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 YY2O15391 372 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 PARNO95453 639 aaKnown RBP18.24■□□□□ 0.51
CBX1-202ENST00000393408 CPSF4O95639 269 aaKnown RBP18.24■□□□□ 0.51
CBX1-202ENST00000393408 COX7A2P14406 83 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 TGFBR2P37173 567 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 PFN3P60673 137 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 RPP38P78345 283 aaKnown RBP18.24■□□□□ 0.51
CBX1-202ENST00000393408 NPRL3Q12980 569 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 CSTF3Q12996 717 aaKnown RBP18.24■□□□□ 0.51
CBX1-202ENST00000393408 PDE12Q6L8Q7 609 aaKnown RBP18.24■□□□□ 0.51
CBX1-202ENST00000393408 USP45Q70EL2 814 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 METTL3Q86U44 580 aaKnown RBP18.24■□□□□ 0.51
CBX1-202ENST00000393408 SYNPOQ8N3V7 929 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 APH1BQ8WW43 257 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 IPCEF1Q8WWN9 437 aaPredicted RBP18.24■□□□□ 0.51
CBX1-202ENST00000393408 MAGEB10Q96LZ2 347 aaPredicted RBP18.24■□□□□ 0.51
CBX1-202ENST00000393408 ATG10Q9H0Y0 220 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 RASSF1Q9NS23 344 aa18.24■□□□□ 0.51
CBX1-202ENST00000393408 PCDHGA12O60330 932 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 DPM1O60762 260 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 C9P02748 559 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 CD22P20273 847 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 CYP2A7P20853 494 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 TGM1P22735 817 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 CREMQ03060 361 aa18.23■□□□□ 0.51
CBX1-202ENST00000393408 FADDQ13158 208 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms