RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 TFB2MQ9H5Q4 396 aaKnown RBP6.97□□□□□ -1.29
NPHP1-203ENST00000393272 DDIT4Q9NX09 232 aa6.97□□□□□ -1.29
NPHP1-203ENST00000393272 NLKQ9UBE8 527 aa6.97□□□□□ -1.29
NPHP1-203ENST00000393272 FBXW11Q9UKB1 542 aa6.97□□□□□ -1.29
NPHP1-203ENST00000393272 GBF1Q92538 1859 aa6.96□□□□□ -1.29
NPHP1-203ENST00000393272 NYNRINQ9P2P1 1898 aaKnown RBP6.96□□□□□ -1.29
NPHP1-203ENST00000393272 PLXNA1Q9UIW2 1896 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 NPEPPSL1A6NEC2 478 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 FABP12A6NFH5 140 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 IFRD1O00458 451 aaPredicted RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 CLDN5O00501 218 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 FABP7O15540 132 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 IFNA16P05015 189 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 TSPAN19P0C672 248 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ARSBP15848 533 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 GGT2P36268 569 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 GZMMP51124 257 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 RORCP51449 518 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 RABGGTBP53611 331 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 RAB25P57735 213 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ERVPABLB-1P60509 514 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 RPL38P63173 70 aaKnown RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 RUNX1T1Q06455 604 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 MRPL28Q13084 256 aaKnown RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 OR4F3Q6IEY1 312 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 KLHL17Q6TDP4 642 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 CTU1Q7Z7A3 348 aaKnown RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 TLK2Q86UE8 772 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 GPAT4Q86UL3 456 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 CALHM3Q86XJ0 350 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 KRTCAP2Q8N6L1 136 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ANKRD53Q8N9V6 530 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 LPCAT1Q8NF37 534 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 STAG3L4Q8TBR4 150 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 GPR152Q8TDT2 470 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 BTN2A2Q8WVV5 523 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 HERVK_113Q902F9 699 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ST8SIA2Q92186 375 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 KIAA1191Q96A73 305 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 FUBP1Q96AE4 644 aaKnown RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 DIRAS2Q96HU8 199 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 KLHL15Q96M94 604 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF578Q96N58 590 aaPredicted RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 SLC2A13Q96QE2 648 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 SLC9A7Q96T83 725 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 TAPBPLQ9BX59 468 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 GABARAPL3Q9BY60 117 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 RNF19AQ9NV58 838 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 CPNE7Q9UBL6 633 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 RIMKLBQ9ULI2 386 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 NDRG2Q9UN36 371 aaKnown RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 VPS9D1Q9Y2B5 631 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 KCTD3Q9Y597 815 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ANKRD36A6QL64 1941 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 TRBV5-3A0A0A0MS03 114 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 IGKV6-21A0A0C4DH24 114 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 E9PAM4 449 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 PCDH17O14917 1159 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 OR1I1O60431 355 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 B3GALT4O96024 378 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ALDH1A1P00352 501 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 FABP3P05413 133 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 TXNP10599 105 aaKnown RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 CCT3P49368 545 aaKnown RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 SUOXP51687 545 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF33BQ06732 778 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 SEMA3AQ14563 771 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 KCTD2Q14681 263 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 FAM98CQ17RN3 349 aaKnown RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 WSCD2Q2TBF2 565 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 CYP27C1Q4G0S4 372 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 FAM182BQ5T319 152 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 FAM160B1Q5W0V3 765 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ATG9BQ674R7 924 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 PAQR3Q6TCH7 311 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 HDDC2Q7Z4H3 204 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 MILR1Q7Z6M3 343 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 UNC93AQ86WB7 457 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ARHGAP12Q8IWW6 846 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 GPALPP1Q8IXQ4 340 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 PLPP6Q8IY26 295 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ATP6V1C2Q8NEY4 427 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 B3GNT7Q8NFL0 401 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 OR56A4Q8NGH8 313 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 OR52H1Q8NGJ2 320 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ST8SIA4Q92187 359 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 GIMAP5Q96F15 307 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 OPALINQ96PE5 141 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 FAM129BQ96TA1 746 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 CPPED1Q9BRF8 314 aaPredicted RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 CCM2Q9BSQ5 444 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 TMEM245Q9H330 911 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 MFSD1Q9H3U5 465 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 HEXA-AS1Q9H8Q6 139 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 REEP1Q9H902 201 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 HHATLQ9HCP6 504 aa6.96□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF70Q9UC06 446 aaPredicted RBP6.96□□□□□ -1.3
NPHP1-203ENST00000393272 SLC6A14Q9UN76 642 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms