RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 TRIM48Q8IWZ4 208 aa11.32□□□□□ -0.6
DDR1-227ENST00000376570 ZCCHC7Q8N3Z6 543 aaKnown RBP11.32□□□□□ -0.6
DDR1-227ENST00000376570 HDDC3Q8N4P3 179 aa11.32□□□□□ -0.6
DDR1-227ENST00000376570 C12orf66Q96MD2 445 aa11.32□□□□□ -0.6
DDR1-227ENST00000376570 DUSP26Q9BV47 211 aa11.32□□□□□ -0.6
DDR1-227ENST00000376570 C11orf16Q9NQ32 467 aa11.32□□□□□ -0.6
DDR1-227ENST00000376570 SLC6A13Q9NSD5 602 aa11.32□□□□□ -0.6
DDR1-227ENST00000376570 ACTR3BQ9P1U1 418 aa11.32□□□□□ -0.6
DDR1-227ENST00000376570 VPS29Q9UBQ0 182 aa11.32□□□□□ -0.6
DDR1-227ENST00000376570 NDRG2Q9UN36 371 aaKnown RBP11.32□□□□□ -0.6
DDR1-227ENST00000376570 ERVW-1Q9UQF0 538 aa11.32□□□□□ -0.6
DDR1-227ENST00000376570 M0QX08 132 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 TAPBPO15533 448 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 ETFAP13804 333 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 CDH3P22223 829 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 SSR2P43308 183 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 TRPC1P48995 793 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 DHCR24Q15392 516 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 CMPK2Q5EBM0 449 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 NOXRED1Q6NXP6 359 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 NEK5Q6P3R8 708 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 ADHFE1Q8IWW8 467 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 PRSS58Q8IYP2 241 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 MARVELD2Q8N4S9 558 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 OR8D1Q8WZ84 308 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 L3HYPDHQ96EM0 354 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 UHRF1Q96T88 793 aaPredicted RBP11.31□□□□□ -0.6
DDR1-227ENST00000376570 PDFQ9HBH1 243 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 SCN3BQ9NY72 215 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 FZD4Q9ULV1 537 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 MED16Q9Y2X0 877 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 PARP14Q460N5 1801 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 LCTP09848 1927 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 BBIP1A8MTZ0 92 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 WASH4PA8MWX3 477 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 H3BNC9 293 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 RPS17P08708 135 aaKnown RBP11.31□□□□□ -0.6
DDR1-227ENST00000376570 SMIM18P0DKX4 95 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 FCGR1AP12314 374 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 CST5P28325 142 aaPredicted RBP11.31□□□□□ -0.6
DDR1-227ENST00000376570 CSNK1DP48730 415 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 MLLT10P55197 1068 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 MAD2L1Q13257 205 aaPredicted RBP11.31□□□□□ -0.6
DDR1-227ENST00000376570 DNASE1L3Q13609 305 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 UGT3A2Q3SY77 523 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 TICAM1Q8IUC6 712 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 STX19Q8N4C7 294 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 PSMA8Q8TAA3 256 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 RHEBL1Q8TAI7 183 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 GAB3Q8WWW8 586 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 F2RL3Q96RI0 385 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 TRIB3Q96RU7 358 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 ZNF382Q96SR6 550 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 SH3GL1Q99961 368 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 ANKRA2Q9H9E1 313 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 TIMMDC1Q9NPL8 285 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 IL20RAQ9UHF4 553 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 SARDHQ9UL12 918 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 SLC35F4A4IF30 521 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 SLC35G4P0C7Q5 338 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 CCNA2P20248 432 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 GPM6BQ13491 265 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 MRPL58Q14197 206 aaKnown RBP11.31□□□□□ -0.6
DDR1-227ENST00000376570 HERC3Q15034 1050 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 RGS21Q2M5E4 152 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 ZNF683Q8IZ20 524 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 OR5AR1Q8NGP9 310 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 C2orf15Q8WU43 125 aaKnown RBP11.31□□□□□ -0.6
DDR1-227ENST00000376570 RORBQ92753 470 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 SCRN2Q96FV2 425 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 CEP19Q96LK0 163 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 GPATCH1Q9BRR8 931 aaKnown RBP11.31□□□□□ -0.6
DDR1-227ENST00000376570 HTATIP2Q9BUP3 242 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 EPB41L1Q9H4G0 881 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 TOR4AQ9NXH8 423 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 INSL6Q9Y581 213 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 CKAP5Q14008 2032 aa11.31□□□□□ -0.6
DDR1-227ENST00000376570 CACNA1GO43497 2377 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 PRAMEF33A0A0G2JMD5 474 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 ABHD14A-ACY1A0A1B0GW23 586 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 ARHGEF33A8MVX0 844 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 BCKDKO14874 412 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 PRKRAO75569 313 aaKnown RBP11.3□□□□□ -0.6
DDR1-227ENST00000376570 CD160O95971 181 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 MAPK1P28482 360 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 HOXC8P31273 242 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 FEN1P39748 380 aaKnown RBP11.3□□□□□ -0.6
DDR1-227ENST00000376570 PXNP49023 591 aaPredicted RBP11.3□□□□□ -0.6
DDR1-227ENST00000376570 CCDC92Q53HC0 331 aaPredicted RBP11.3□□□□□ -0.6
DDR1-227ENST00000376570 NHSL2Q5HYW2 709 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 TMEM236Q5W0B7 351 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 CAPN13Q6MZZ7 669 aaPredicted RBP11.3□□□□□ -0.6
DDR1-227ENST00000376570 ELMSAN1Q6PJG2 1045 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 ZNF551Q7Z340 670 aaPredicted RBP11.3□□□□□ -0.6
DDR1-227ENST00000376570 PIWIL3Q7Z3Z3 882 aaKnown RBP11.3□□□□□ -0.6
DDR1-227ENST00000376570 R3HCC1LQ7Z5L2 792 aaKnown RBP11.3□□□□□ -0.6
DDR1-227ENST00000376570 PHYKPLQ8IUZ5 450 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 ADGRG5Q8IZF4 528 aa11.3□□□□□ -0.6
DDR1-227ENST00000376570 PELI3Q8N2H9 469 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms