RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 CAMK1GQ96NX5 476 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 C6orf106Q9H6K1 298 aaPredicted RBP17.04■□□□□ 0.32
CTTN-203ENST00000376561 PRM3Q9NNZ6 103 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 C2orf42Q9NWW7 574 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 C15orf38-AP3S2A0A0A6YYH1 394 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 A0A1W2PPV9 198 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 FOXE1O00358 373 aaPredicted RBP17.04■□□□□ 0.32
CTTN-203ENST00000376561 SH3BGRLO75368 114 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 VHLP40337 213 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 CTBSQ01459 385 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 PWP1Q13610 501 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 MAPKAPK3Q16644 382 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 SPATS1Q496A3 300 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 WLSQ5T9L3 541 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 ARPINQ7Z6K5 226 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 FAM129CQ86XR2 697 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 RIMKLAQ8IXN7 391 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 SYNPOQ8N3V7 929 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 LINC01555Q8NAE3 123 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 TMEM145Q8NBT3 493 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 ZNF740Q8NDX6 193 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 GTF2H4Q92759 462 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 SH3KBP1Q96B97 665 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 TESCQ96BS2 214 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 PCBD2Q9H0N5 130 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 CYP8B1Q9UNU6 501 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 C15orf41Q9Y2V0 281 aa17.04■□□□□ 0.32
CTTN-203ENST00000376561 DNAJA2O60884 412 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 KCNH1O95259 989 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 YPEL5P62699 121 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 PLIN5Q00G26 463 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 KRT33BQ14525 404 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 SF1Q15637 639 aaKnown RBP17.03■□□□□ 0.32
CTTN-203ENST00000376561 RD3Q7Z3Z2 195 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 SPATA24Q86W54 205 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 SYT12Q8IV01 421 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 C1orf52Q8N6N3 182 aaKnown RBP17.03■□□□□ 0.32
CTTN-203ENST00000376561 CHTF18Q8WVB6 975 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 UBE2E3Q969T4 207 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 TSACCQ96A04 125 aaPredicted RBP17.03■□□□□ 0.32
CTTN-203ENST00000376561 TOE1Q96GM8 510 aaKnown RBP17.03■□□□□ 0.32
CTTN-203ENST00000376561 PPM1MQ96MI6 270 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 TMEM74Q96NL1 305 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 OR52E6Q96RD3 313 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 CGREF1Q99674 301 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 DMRT3Q9NQL9 472 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 PPT2Q9UMR5 302 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 TRIOO75962 3097 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 CROCCQ5TZA2 2017 aa17.03■□□□□ 0.32
CTTN-203ENST00000376561 LRATO95237 230 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 IGHV4-34P06331 123 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 FOSL2P15408 326 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 PSMB5P28074 263 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 RAB28P51157 221 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 PHC1P78364 1004 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 PRKCQQ04759 706 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 GAS6Q14393 721 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 RPE65Q16518 533 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 SPIN4Q56A73 249 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 ZFP1Q6P2D0 407 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 ALG2Q9H553 416 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 MVB12BQ9H7P6 319 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 SCHIP1Q9P0W5 487 aaPredicted RBP17.02■□□□□ 0.32
CTTN-203ENST00000376561 PNMA8BQ9ULN7 279 aaPredicted RBP17.02■□□□□ 0.32
CTTN-203ENST00000376561 HS3ST3A1Q9Y663 406 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 TNFRSF10CO14798 259 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 MYO1DO94832 1006 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 PRPS1L1P21108 318 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 RAE1P78406 368 aaKnown RBP17.02■□□□□ 0.32
CTTN-203ENST00000376561 TMIGD1Q6UXZ0 262 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 LPCAT2Q7L5N7 544 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 KRT78Q8N1N4 520 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 HHIPQ96QV1 700 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 NMRK1Q9NWW6 199 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 TBC1D29Q9UFV1 150 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 TSC22D4Q9Y3Q8 395 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 NEUROG3Q9Y4Z2 214 aa17.02■□□□□ 0.32
CTTN-203ENST00000376561 MTHFD1P11586 935 aaKnown RBP17.01■□□□□ 0.31
CTTN-203ENST00000376561 AK4P27144 223 aaPredicted RBP17.01■□□□□ 0.31
CTTN-203ENST00000376561 S100A3P33764 101 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 PIK3CBP42338 1070 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 GSK3BP49841 420 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 CCR5P51681 352 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 EEFSECP57772 596 aaKnown RBP17.01■□□□□ 0.31
CTTN-203ENST00000376561 LIPEQ05469 1076 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 BNIP2Q12982 314 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 LRRC32Q14392 662 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 KIAA0895LQ68EN5 471 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 CYP2R1Q6VVX0 501 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 DHFR2Q86XF0 187 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 GPR156Q8NFN8 814 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 OR52E1Q8NGJ3 308 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 GFM2Q969S9 779 aaKnown RBP17.01■□□□□ 0.31
CTTN-203ENST00000376561 RAB11FIP5Q9BXF6 653 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 XKR8Q9H6D3 395 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 PELI2Q9HAT8 420 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 WASH6PQ9NQA3 447 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 CUEDC1Q9NWM3 386 aaPredicted RBP17.01■□□□□ 0.31
CTTN-203ENST00000376561 VAPAQ9P0L0 249 aa17.01■□□□□ 0.31
CTTN-203ENST00000376561 PRAMEF33A0A0G2JMD5 474 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms