RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 NPPBP16860 134 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 TBPL1P62380 186 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 CAV1Q03135 178 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 CKAP4Q07065 602 aaKnown RBP13.61□□□□□ -0.23
CLCN6-203ENST00000376490 ATP1A4Q13733 1029 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 HKDC1Q2TB90 917 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 PRTGQ2VWP7 1150 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 LACTB2Q53H82 288 aaPredicted RBP13.61□□□□□ -0.23
CLCN6-203ENST00000376490 COLEC12Q5KU26 742 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 PRAMEF13Q5VWM6 474 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 TCTN3Q6NUS6 607 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 COX15Q7KZN9 410 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 CCDC25Q86WR0 208 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 RAB43Q86YS6 212 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 CEP97Q8IW35 865 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 TRIM54Q9BYV2 358 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 RHOJQ9H4E5 214 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 TMEM184CQ9NVA4 438 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 ARL15Q9NXU5 204 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 NSMCE4AQ9NXX6 385 aa13.61□□□□□ -0.23
CLCN6-203ENST00000376490 TCRBV9S1A1TA0A576 114 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 ESYT3A0FGR9 886 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 A6NL46 340 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 CDC7O00311 574 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 GUCA1CO95843 209 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 STATHP02808 62 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 PDGFAP04085 211 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 EZRP15311 586 aaKnown RBP13.6□□□□□ -0.23
CLCN6-203ENST00000376490 ZNF37AP17032 561 aaPredicted RBP13.6□□□□□ -0.23
CLCN6-203ENST00000376490 MAGEA4P43358 317 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 RELAQ04206 551 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 NKG7Q16617 165 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 SBSNQ6UWP8 590 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 SHISA6Q6ZSJ9 500 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 ASB18Q6ZVZ8 466 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 CYS1Q717R9 158 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 MED25Q71SY5 747 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 NKAPQ8N5F7 415 aaKnown RBP13.6□□□□□ -0.23
CLCN6-203ENST00000376490 CSNK1A1LQ8N752 337 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 ANKRD49Q8WVL7 239 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 COL26A1Q96A83 441 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 FKBP10Q96AY3 582 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 PYCR2Q96C36 320 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 VPS39Q96JC1 886 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 CABS1Q96KC9 395 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 C10orf90Q96M02 699 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 SGPP1Q9BX95 441 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 ZNF304Q9HCX3 659 aa13.6□□□□□ -0.23
CLCN6-203ENST00000376490 RUVBL1Q9Y265 456 aaKnown RBP13.6□□□□□ -0.23
CLCN6-203ENST00000376490 HELZ2Q9BYK8 2649 aaKnown RBP13.59□□□□□ -0.23
CLCN6-203ENST00000376490 FAM159BA6NKW6 160 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 J3QKU1 62 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 MASP2O00187 686 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 LCMT2O60294 686 aaKnown RBP13.59□□□□□ -0.23
CLCN6-203ENST00000376490 C1QAP02745 245 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 ALBP02768 609 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 HRH2P25021 359 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 EMP3P54852 163 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 SNRPNP63162 240 aaKnown RBP13.59□□□□□ -0.23
CLCN6-203ENST00000376490 CSNK1G2P78368 415 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 WHAMMP3Q1A5X7 153 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 MUM1Q2TAK8 710 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 CAPN13Q6MZZ7 669 aaPredicted RBP13.59□□□□□ -0.23
CLCN6-203ENST00000376490 C8orf74Q6P047 294 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 LCTLQ6UWM7 567 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 ATG14Q6ZNE5 492 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 PPP1R32Q7Z5V6 425 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 MRGPREQ86SM8 312 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 C17orf64Q86WR6 236 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 TMEM102Q8N9M5 508 aaPredicted RBP13.59□□□□□ -0.23
CLCN6-203ENST00000376490 CDKL2Q92772 493 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 RERGQ96A58 199 aaPredicted RBP13.59□□□□□ -0.23
CLCN6-203ENST00000376490 FBXL8Q96CD0 374 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 MACROD1Q9BQ69 325 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 SLC25A23Q9BV35 468 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 PCBD2Q9H0N5 130 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 SLC26A1Q9H2B4 701 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 SOX17Q9H6I2 414 aaPredicted RBP13.59□□□□□ -0.23
CLCN6-203ENST00000376490 CAB39LQ9H9S4 337 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 LRRC4CQ9HCJ2 640 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 CTSFQ9UBX1 484 aa13.59□□□□□ -0.23
CLCN6-203ENST00000376490 SPTA1P02549 2419 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 FEZF1A0PJY2 475 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 PABPN1LA6NDY0 278 aaKnown RBP13.58□□□□□ -0.24
CLCN6-203ENST00000376490 NPEPPSL1A6NEC2 478 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 PEX12O00623 359 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 FFAR3O14843 346 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 GPR42O15529 346 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 P2RX6O15547 441 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 FAM155BO75949 473 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 ENO2P09104 434 aaPredicted RBP13.58□□□□□ -0.24
CLCN6-203ENST00000376490 GSTA2P09210 222 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 CDH1P12830 882 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 CCND1P24385 295 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 SLC12A2P55011 1212 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 AP1S2P56377 157 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 GUCY2DQ02846 1103 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 PRMT9Q6P2P2 845 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 CTAGE3PQ8IX95 158 aa13.58□□□□□ -0.24
CLCN6-203ENST00000376490 SPATA6LQ8N4H0 392 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms