RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 GPLD1P80108 840 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 GTF2H3Q13889 308 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 KDM4DQ6B0I6 523 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 GCNT7Q6ZNI0 430 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 BPHLQ86WA6 291 aaPredicted RBP12.55□□□□□ -0.4
MSH5-204ENST00000375755 HS6ST3Q8IZP7 471 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 TCAIMQ8N3R3 496 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 SLC13A3Q8WWT9 602 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 JPH3Q8WXH2 748 aaPredicted RBP12.55□□□□□ -0.4
MSH5-204ENST00000375755 FUBP1Q96AE4 644 aaKnown RBP12.55□□□□□ -0.4
MSH5-204ENST00000375755 PPP1R2P1Q96PQ5 205 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 AARSD1Q9BTE6 412 aaKnown RBP12.55□□□□□ -0.4
MSH5-204ENST00000375755 OR51E2Q9H255 320 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 MAGIXQ9H6Y5 334 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 ZFP14Q9HCL3 533 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 EIF2B4Q9UI10 523 aaKnown RBP12.55□□□□□ -0.4
MSH5-204ENST00000375755 ERVW-1Q9UQF0 538 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 ARL5AQ9Y689 179 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 OBSL1O75147 1896 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 CD3EAPO15446 510 aaKnown RBP12.54□□□□□ -0.4
MSH5-204ENST00000375755 PCDHGA12O60330 932 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 MRPS14O60783 128 aaKnown RBP12.54□□□□□ -0.4
MSH5-204ENST00000375755 PRAMEF11O60813 436 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 TIMP1P01033 207 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 RETP07949 1114 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 ATXN1LP0C7T5 689 aaKnown RBP12.54□□□□□ -0.4
MSH5-204ENST00000375755 IFNA8P32881 189 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 SLC15A1P46059 708 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 NRIP1P48552 1158 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 ERVPABLB-1P60509 514 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 CREMQ03060 361 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 TIGD6Q17RP2 521 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 FAM214AQ32MH5 1076 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 VN1R5Q7Z5H4 357 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 OR52E4Q8NGH9 312 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 WFDC5Q8TCV5 224 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 ADAMTS19Q8TE59 1207 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 APH1BQ8WW43 257 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 SMG9Q9H0W8 520 aaKnown RBP12.54□□□□□ -0.4
MSH5-204ENST00000375755 SLA2Q9H6Q3 261 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 GIMAP4Q9NUV9 329 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 CCDC59Q9P031 241 aaKnown RBP12.54□□□□□ -0.4
MSH5-204ENST00000375755 RAPGEFL1Q9UHV5 662 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 ABCG2Q9UNQ0 655 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 A0A0G2JMP0 313 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 SEC22BO75396 215 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 MLYCDO95822 493 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 GLP2RO95838 553 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 IL10RBQ08334 325 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 C19orf57Q0VDD7 668 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 STARD3Q14849 445 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 NR6A1Q15406 480 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 RFTN2Q52LD8 501 aaPredicted RBP12.54□□□□□ -0.4
MSH5-204ENST00000375755 YIF1BQ5BJH7 314 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 LETMD1Q6P1Q0 360 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 ZNF517Q6ZMY9 492 aaPredicted RBP12.54□□□□□ -0.4
MSH5-204ENST00000375755 SLC46A3Q7Z3Q1 461 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 ZDHHC21Q8IVQ6 265 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.54□□□□□ -0.4
MSH5-204ENST00000375755 OR56A4Q8NGH8 313 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 IPCEF1Q8WWN9 437 aaPredicted RBP12.54□□□□□ -0.4
MSH5-204ENST00000375755 OR2A14Q96R47 310 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 KLF16Q9BXK1 252 aaPredicted RBP12.54□□□□□ -0.4
MSH5-204ENST00000375755 DERL2Q9GZP9 239 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 GABARAPL1Q9H0R8 117 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 C11orf49Q9H6J7 331 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 CXXC1Q9P0U4 656 aaPredicted RBP12.54□□□□□ -0.4
MSH5-204ENST00000375755 MKLN1Q9UL63 735 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 BTBD3Q9Y2F9 522 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 PEX16Q9Y5Y5 336 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 PLXNA4Q9HCM2 1894 aa12.54□□□□□ -0.4
MSH5-204ENST00000375755 KRT87PA6NCN2 255 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 CBX4O00257 560 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 URODP06132 367 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 CNPP09543 421 aaKnown RBP12.53□□□□□ -0.4
MSH5-204ENST00000375755 IRF3Q14653 427 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 PTGR1Q14914 329 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 TYSND1Q2T9J0 566 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 PARP15Q460N3 678 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 SPANXN2Q5MJ10 180 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 IL27RAQ6UWB1 636 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 PRR23CQ6ZRP0 262 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 CCDC190Q86UF4 302 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 ELMOD2Q8IZ81 293 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 ANGPTL6Q8NI99 470 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 BLOC1S5Q8TDH9 187 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 PYURFQ96I23 114 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 PHOX2BQ99453 314 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 SH3GL1Q99961 368 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 POPDC3Q9HBV1 291 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 SLC6A13Q9NSD5 602 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 SPG21Q9NZD8 308 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 MED16Q9Y2X0 877 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 INSL5Q9Y5Q6 135 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 MYO1GB0I1T2 1018 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 CTDSP2O14595 271 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 RHOBTB1O94844 696 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 DIRAS1O95057 198 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 CYP2A7P20853 494 aa12.53□□□□□ -0.4
MSH5-204ENST00000375755 SLC11A2P49281 568 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms