RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 VPS39Q96JC1 886 aa19.6■□□□□ 0.73
SMNDC1-201ENST00000369592 SPSB2Q99619 263 aa19.6■□□□□ 0.73
SMNDC1-201ENST00000369592 PCBD2Q9H0N5 130 aa19.6■□□□□ 0.73
SMNDC1-201ENST00000369592 CCDC177Q9NQR7 707 aaPredicted RBP19.6■□□□□ 0.73
SMNDC1-201ENST00000369592 ZDHHC18Q9NUE0 388 aa19.6■□□□□ 0.73
SMNDC1-201ENST00000369592 TMEM184CQ9NVA4 438 aa19.6■□□□□ 0.73
SMNDC1-201ENST00000369592 IRAK4Q9NWZ3 460 aa19.6■□□□□ 0.73
SMNDC1-201ENST00000369592 NOVA2Q9UNW9 492 aaKnown RBP19.6■□□□□ 0.73
SMNDC1-201ENST00000369592 DOCK10Q96BY6 2186 aa19.6■□□□□ 0.73
SMNDC1-201ENST00000369592 PTPN13Q12923 2485 aa19.6■□□□□ 0.73
SMNDC1-201ENST00000369592 KCNE1BA0A087WTH5 132 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 HAT1O14929 419 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 ENO2P09104 434 aaPredicted RBP19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 NPPBP16860 134 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 HRH2P25021 359 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 SLC9A5Q14940 896 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 NKG7Q16617 165 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 PRAMEF13Q5VWM6 474 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 LCTLQ6UWM7 567 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 PPP1R32Q7Z5V6 425 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 PALM2Q8IXS6 379 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 ANKRD49Q8WVL7 239 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 PTERQ96BW5 349 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 FBXL8Q96CD0 374 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 LRRC1Q9BTT6 524 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 ING2Q9H160 280 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 POPDC3Q9HBV1 291 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 LRRC4CQ9HCJ2 640 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 PTRH2Q9Y3E5 179 aaKnown RBP19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 PCDHGA9Q9Y5G4 932 aaKnown RBP19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 NBASA2RRP1 2371 aa19.59■□□□□ 0.73
SMNDC1-201ENST00000369592 IGLV3-12A0A075B6K2 115 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 ARGFXA6NJG6 315 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 MKRN2OSH3BPM6 223 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 H7BY64 318 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 PDGFAP04085 211 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 MAGEA4P43358 317 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 OR1D4P47884 311 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 SNRPNP63162 240 aaKnown RBP19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 CSNK1G2P78368 415 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 SRSF1Q07955 248 aaKnown RBP eCLIP19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 CHAF1BQ13112 559 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 NAE1Q13564 534 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 TSTA3Q13630 321 aaPredicted RBP19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 ATP1A4Q13733 1029 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 ZNF460Q14592 562 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 PRMT9Q6P2P2 845 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 CAPN12Q6ZSI9 719 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 C3orf62Q6ZUJ4 267 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 VN1R4Q7Z5H5 301 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 MRGPREQ86SM8 312 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 MMGT1Q8N4V1 131 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 NACC2Q96BF6 587 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 PRAP1Q96NZ9 151 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 IP6K3Q96PC2 410 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 OR4K3Q96R72 315 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 ATG10Q9H0Y0 220 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 ZNF71Q9NQZ8 489 aaPredicted RBP19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 UTP6Q9NYH9 597 aaKnown RBP19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 NDOR1Q9UHB4 597 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 GPN3Q9UHW5 284 aaPredicted RBP19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 RUVBL1Q9Y265 456 aaKnown RBP19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 TP53TG5Q9Y2B4 290 aa19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 MTO1Q9Y2Z2 717 aaKnown RBP19.58■□□□□ 0.72
SMNDC1-201ENST00000369592 P2RX6O15547 441 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 URI1O94763 535 aaPredicted RBP19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 PIM1P11309 404 aaPredicted RBP19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 CCND1P24385 295 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 FOLR3P41439 243 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 SLC7A5Q01650 507 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 POU4F1Q01851 419 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 MUM1Q2TAK8 710 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 HKDC1Q2TB90 917 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 LACTB2Q53H82 288 aaPredicted RBP19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 GARNL3Q5VVW2 1013 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 MED25Q71SY5 747 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 PRICKLE2Q7Z3G6 844 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 RAB43Q86YS6 212 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 NKAPQ8N5F7 415 aaKnown RBP19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 CSNK1A1LQ8N752 337 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 TMEM102Q8N9M5 508 aaPredicted RBP19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 ABHD11Q8NFV4 315 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 OR4K1Q8NGD4 311 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 TM4SF19Q96DZ7 209 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 MVB12AQ96EY5 273 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 GPR22Q99680 433 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 CPNE1Q99829 537 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 SARGQ9BW04 601 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 ARL15Q9NXU5 204 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 CTSFQ9UBX1 484 aa19.57■□□□□ 0.72
SMNDC1-201ENST00000369592 ESYT3A0FGR9 886 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 CDC7O00311 574 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 FOXS1O43638 330 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 HIST1H2AGP0C0S8 130 aaPredicted RBP19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 NR1D1P20393 614 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 HIST1H2ADP20671 130 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 CDKL1Q00532 357 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 ZKSCAN8Q15776 578 aaPredicted RBP19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 THEMIS2Q5TEJ8 643 aa19.56■□□□□ 0.72
SMNDC1-201ENST00000369592 PLD3Q8IV08 490 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms