RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 TRAPPC5Q8IUR0 188 aa9.02□□□□□ -0.97
GTF3C2-202ENST00000359541 VRK3Q8IV63 474 aa9.02□□□□□ -0.97
GTF3C2-202ENST00000359541 SPOCK3Q9BQ16 436 aa9.02□□□□□ -0.97
GTF3C2-202ENST00000359541 INPP5KQ9BT40 448 aa9.02□□□□□ -0.97
GTF3C2-202ENST00000359541 TMEM106CQ9BVX2 250 aa9.02□□□□□ -0.97
GTF3C2-202ENST00000359541 SMURF2Q9HAU4 748 aa9.02□□□□□ -0.97
GTF3C2-202ENST00000359541 ITM2CQ9NQX7 267 aa9.02□□□□□ -0.97
GTF3C2-202ENST00000359541 THG1LQ9NWX6 298 aaKnown RBP9.02□□□□□ -0.97
GTF3C2-202ENST00000359541 SH3BP4Q9P0V3 963 aa9.02□□□□□ -0.97
GTF3C2-202ENST00000359541 ZNF282Q9UDV7 671 aaPredicted RBP9.02□□□□□ -0.97
GTF3C2-202ENST00000359541 ITM2BQ9Y287 266 aa9.02□□□□□ -0.97
GTF3C2-202ENST00000359541 RWDD3Q9Y3V2 267 aa9.02□□□□□ -0.97
GTF3C2-202ENST00000359541 ANAPC1Q9H1A4 1944 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TRBV5-3A0A0A0MS03 114 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TSPAN11A1L157 253 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 ARHGEF33A8MVX0 844 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TCF3P15923 654 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TIMP2P16035 220 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 DCTP40126 519 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TMBIM6P55061 237 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 PFN3P60673 137 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 HPCAP84074 193 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 KCNAB2Q13303 367 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 LAPTM5Q13571 262 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 AAK1Q2M2I8 961 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 ZC3H12BQ5HYM0 836 aaKnown RBP9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 SHQ1Q6PI26 577 aaKnown RBP9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TBPL2Q6SJ96 375 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 ADIPOR2Q86V24 386 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 MSRB3Q8IXL7 192 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 OR8J2Q8NGG1 315 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 NETO1Q8TDF5 533 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 OR8D1Q8WZ84 308 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 ABTB1Q969K4 478 aaPredicted RBP9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 CXorf40BQ96DE9 158 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 FANCEQ9HB96 536 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 HCFC1R1Q9NWW0 138 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 MARK1Q9P0L2 795 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 STOX2Q9P2F5 926 aaPredicted RBP9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 MRPS23Q9Y3D9 190 aaKnown RBP9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 IRAK3Q9Y616 596 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 WNT6Q9Y6F9 365 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TRIM64A6NGJ6 449 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TTC34A8MYJ7 566 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 BCL10O95999 233 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 IFNA14P01570 189 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 EPORP19235 508 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 DCKP27707 260 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 HOXA9P31269 272 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 DNAJA1P31689 397 aaKnown RBP9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 EPHA5P54756 1037 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 MTAPQ13126 283 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 STARD3Q14849 445 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 C6orf141Q5SZD1 244 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 CPZQ66K79 652 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TMPRSS11BQ86T26 416 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 CACUL1Q86Y37 369 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 ATG16L2Q8NAA4 619 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 IKZF5Q9H5V7 419 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 IL23AQ9NPF7 189 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 SAMHD1Q9Y3Z3 626 aaKnown RBP9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 U3KQV3 271 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 FGBP02675 491 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 FPR1P21462 350 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TACR1P25103 407 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 ELK4P28324 431 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 GPR1P46091 355 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 YAP1P46937 504 aaKnown RBP9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 PPP2R2BQ00005 443 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TAGLNQ01995 201 aaKnown RBP9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 PMS2P3Q13401 168 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 VEZF1Q14119 521 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TRMT11Q7Z4G4 463 aaKnown RBP9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 SVOPQ8N4V2 548 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 PJA1Q8NG27 643 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 NUDT8Q8WV74 236 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 RIBC2Q9H4K1 309 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 CCNB1IP1Q9NPC3 277 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 TLR9Q9NR96 1032 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 PCDHB11Q9Y5F2 797 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 HSPE1-MOB4S4R3N1 261 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 CACNA1GO43497 2377 aa9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 ZFC3H1O60293 1989 aaKnown RBP9.01□□□□□ -0.97
GTF3C2-202ENST00000359541 PRR23AA6NEV1 266 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 E7EQ34 232 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 UPK1AO00322 258 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 SCAMP2O15127 329 aaKnown RBP9□□□□□ -0.97
GTF3C2-202ENST00000359541 SUV39H1O43463 412 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 ADH5P11766 374 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 GSTM2P28161 218 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 KDELR2P33947 212 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 TMED1Q13445 227 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 ZNF77Q15935 545 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 FNDC3BQ53EP0 1204 aaKnown RBP9□□□□□ -0.97
GTF3C2-202ENST00000359541 PYCR3Q53H96 274 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 RAET1GQ6H3X3 334 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 ASTLQ6HA08 431 aaPredicted RBP9□□□□□ -0.97
GTF3C2-202ENST00000359541 DSG4Q86SJ6 1040 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 NPAS3Q8IXF0 933 aa9□□□□□ -0.97
GTF3C2-202ENST00000359541 C1orf52Q8N6N3 182 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms