RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 MAOBP27338 520 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 SERPINB1P30740 379 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 GALNSP34059 522 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 DHPSP49366 369 aaPredicted RBP3.38□□□□□ -1.87
CCDC66-202ENST00000341455 HNMTP50135 292 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 DNA2P51530 1060 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 CTSCP53634 463 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 PMS2P54278 862 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 DNAJB13P59910 316 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 IRX1P78414 480 aaPredicted RBP3.38□□□□□ -1.87
CCDC66-202ENST00000341455 GALNT1Q10472 559 aaPredicted RBP3.38□□□□□ -1.87
CCDC66-202ENST00000341455 PTPRRQ15256 657 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 TMED2Q15363 201 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 TBCCQ15814 346 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 RPE65Q16518 533 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 PGS1Q32NB8 556 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 GGTA1PQ4G0N0 100 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 BEND6Q5SZJ8 279 aaPredicted RBP3.38□□□□□ -1.87
CCDC66-202ENST00000341455 ZNF648Q5T619 568 aaPredicted RBP3.38□□□□□ -1.87
CCDC66-202ENST00000341455 FAXCQ5TGI0 409 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 ALS2CLQ60I27 953 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 KCTD16Q68DU8 428 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 FAM151BQ6UXP7 276 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 FAM83HQ6ZRV2 1179 aaPredicted RBP3.38□□□□□ -1.87
CCDC66-202ENST00000341455 B4GALNT4Q76KP1 1039 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 ARHGAP22Q7Z5H3 698 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 SLC9B2Q86UD5 537 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 AMZ2Q86W34 360 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 PRR18Q8N4B5 295 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 SLC25A41Q8N5S1 370 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 ZBTB2Q8N680 514 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 ZNF527Q8NB42 609 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 RAB3IL1Q8TBN0 382 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 DENND1AQ8TEH3 1009 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 LRTOMTQ8WZ04 291 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 TLCD1Q96CP7 247 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 ZNF764Q96H86 408 aaPredicted RBP3.38□□□□□ -1.87
CCDC66-202ENST00000341455 PRR11Q96HE9 360 aaPredicted RBP3.38□□□□□ -1.87
CCDC66-202ENST00000341455 SLC41A2Q96JW4 573 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 LRFN5Q96NI6 719 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 DDA1Q9BW61 102 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 TMEM120AQ9BXJ8 343 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 ABCG4Q9H172 646 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 TM7SF3Q9NS93 570 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 MRGBPQ9NV56 204 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 FAM53CQ9NYF3 392 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 KCNK4Q9NYG8 393 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 OR6C2Q9NZP2 312 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 SENP1Q9P0U3 644 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 ZNF624Q9P2J8 865 aaPredicted RBP3.38□□□□□ -1.87
CCDC66-202ENST00000341455 SLC23A2Q9UGH3 650 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 APOBEC3BQ9UH17 382 aaKnown RBP3.38□□□□□ -1.87
CCDC66-202ENST00000341455 TMEM98Q9Y2Y6 226 aa3.38□□□□□ -1.87
CCDC66-202ENST00000341455 MYO18AQ92614 2054 aaKnown RBP3.37□□□□□ -1.87
CCDC66-202ENST00000341455 CACNA1EQ15878 2313 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 A0A1W2PPV9 198 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 PRPF4O43172 522 aaKnown RBP eCLIP3.37□□□□□ -1.87
CCDC66-202ENST00000341455 USP12O75317 370 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 IPO13O94829 963 aaKnown RBP3.37□□□□□ -1.87
CCDC66-202ENST00000341455 SLC25A14O95258 325 aaPredicted RBP3.37□□□□□ -1.87
CCDC66-202ENST00000341455 C1orf105O95561 183 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 SLC35E2BP0CK96 405 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 THRAP10827 490 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 SPINK2P20155 84 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 SPRP35270 261 aaPredicted RBP3.37□□□□□ -1.87
CCDC66-202ENST00000341455 KRT20P35900 424 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 SERPINB5P36952 375 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 CAPZBP47756 277 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 SERPINB8P50452 374 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 AGFG1P52594 562 aaKnown RBP3.37□□□□□ -1.87
CCDC66-202ENST00000341455 PRKAA2P54646 552 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 CLDN2P57739 230 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 GPR85P60893 370 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 VSNL1P62760 191 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 PHC1P78364 1004 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 ABATP80404 500 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 SRSF2Q01130 221 aaKnown RBP3.37□□□□□ -1.87
CCDC66-202ENST00000341455 CDC16Q13042 620 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 KIR2DS3Q14952 304 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 POU4F3Q15319 338 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 TRADDQ15628 312 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 TTLL9Q3SXZ7 439 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 MANEAQ5SRI9 462 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 CYB5D1Q6P9G0 228 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 TRMT10BQ6PF06 316 aaKnown RBP3.37□□□□□ -1.87
CCDC66-202ENST00000341455 C19orf48Q6RUI8 117 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 SBSNQ6UWP8 590 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 ZNF517Q6ZMY9 492 aaPredicted RBP3.37□□□□□ -1.87
CCDC66-202ENST00000341455 PTAR1Q7Z6K3 402 aaPredicted RBP3.37□□□□□ -1.87
CCDC66-202ENST00000341455 SNX32Q86XE0 403 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 DCUN1D3Q8IWE4 304 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 CISD2Q8N5K1 135 aaKnown RBP3.37□□□□□ -1.87
CCDC66-202ENST00000341455 BMPERQ8N8U9 685 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 DNAAF3Q8N9W5 541 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 KCT2Q8NC54 265 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 ACVR1CQ8NER5 493 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 LKAAEAR1Q8TD35 194 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 SETD7Q8WTS6 366 aaKnown RBP3.37□□□□□ -1.87
CCDC66-202ENST00000341455 PYROXD1Q8WU10 500 aa3.37□□□□□ -1.87
CCDC66-202ENST00000341455 ASZ1Q8WWH4 475 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms