RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PSMD11O00231 422 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 GABARAPO95166 117 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 TRBC1P01850 177 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 GALTP07902 379 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 GSTT2P0CG29 244 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 GSTT2BP0CG30 244 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 NPRL3Q12980 569 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 GANABQ14697 944 aaKnown RBP13.95□□□□□ -0.18
CPSF7-201ENST00000340437 MAD2L1BPQ15013 274 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-201ENST00000340437 C6orf183Q5T699 404 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 KIAA1614Q5VZ46 1190 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 ZSWIM9Q86XI8 627 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 RAVER1Q8IY67 606 aaKnown RBP13.95□□□□□ -0.18
CPSF7-201ENST00000340437 OR6Q1Q8NGQ2 317 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 OR5AK3PQ8NH89 298 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 P2RY13Q9BPV8 354 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 KCNS3Q9BQ31 491 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 TMEM121BQ9BXQ6 578 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-201ENST00000340437 BTBD3Q9Y2F9 522 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 H7C4K7 107 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 STSP08842 583 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 RYKP34925 604 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 CDH12P55289 794 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 FCGRTP55899 365 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 DAB2P98082 770 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 LRRC74AQ0VAA2 488 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 CAMK2GQ13555 558 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-201ENST00000340437 HIST2H2ACQ16777 129 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-201ENST00000340437 SVOPQ8N4V2 548 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 Q96MT0 163 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 IL1RAPQ9NPH3 570 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 GPC6Q9Y625 555 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-201ENST00000340437 SLC16A6O15403 523 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 RGS5O15539 181 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 SH3BP5O60239 455 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 FPR1P21462 350 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 TRPC1P48995 793 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 ZXDCQ2QGD7 858 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-201ENST00000340437 IER5LQ5T953 404 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 FRG2Q64ET8 278 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 RETSATQ6NUM9 610 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 PLEKHG7Q6ZR37 379 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 SPATC1Q76KD6 591 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 TRIM46Q7Z4K8 759 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 RNF180Q86T96 592 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 PDLIM5Q96HC4 596 aaKnown RBP13.95□□□□□ -0.18
CPSF7-201ENST00000340437 FRG2BQ96QU4 278 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 FEVQ99581 238 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 TPT1P8Q9HAU6 139 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 TM9SF3Q9HD45 589 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 TRPS1Q9UHF7 1281 aa13.95□□□□□ -0.18
CPSF7-201ENST00000340437 EPORP19235 508 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 HOXD12P35452 270 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 NR4A2P43354 598 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 TUFMP49411 452 aaKnown RBP13.94□□□□□ -0.18
CPSF7-201ENST00000340437 CRISP3P54108 245 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 CYP4F8P98187 520 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 NAE1Q13564 534 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 TIGD6Q17RP2 521 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 C11orf74Q86VG3 221 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 C2orf73Q8N5S3 287 aaPredicted RBP13.94□□□□□ -0.18
CPSF7-201ENST00000340437 SPATA17Q96L03 361 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 OR51E2Q9H255 320 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 KCTD5Q9NXV2 234 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 PTPRDP23468 1912 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 NLRC5Q86WI3 1866 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 WNT9AO14904 365 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 SNPHO15079 494 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 SUV39H1O43463 412 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 KCNK5O95279 499 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 ZDHHC11BP0C7U3 371 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 NRIP1P48552 1158 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 MED22Q15528 200 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 CCDC71Q8IV32 467 aaPredicted RBP13.94□□□□□ -0.18
CPSF7-201ENST00000340437 PCSK9Q8NBP7 692 aaKnown RBP13.94□□□□□ -0.18
CPSF7-201ENST00000340437 NTMT1Q9BV86 223 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 SIAEQ9HAT2 523 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 RLIMQ9NVW2 624 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 TMEM161AQ9NX61 479 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 IMPAD1Q9NX62 359 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 RPS6KA6Q9UK32 745 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 ACSL6Q9UKU0 697 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 ERVK-11Q9UQG0 969 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 HTR3EA5X5Y0 456 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 GRXCR2A6NFK2 248 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 MGAT4DA6NG13 374 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 A6NL46 340 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 YY2O15391 372 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 CD40LGP29965 261 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 HOXA9P31269 272 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 S100A5P33763 92 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 SPIBQ01892 262 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 MRPL58Q14197 206 aaKnown RBP13.94□□□□□ -0.18
CPSF7-201ENST00000340437 DUOXA1Q1HG43 343 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 C14orf119Q9NWQ9 140 aa13.94□□□□□ -0.18
CPSF7-201ENST00000340437 KIAA1522Q9P206 1035 aaPredicted RBP13.94□□□□□ -0.18
CPSF7-201ENST00000340437 FNDC1Q4ZHG4 1894 aaPredicted RBP13.94□□□□□ -0.18
CPSF7-201ENST00000340437 MANSC4A6NHS7 340 aaPredicted RBP13.93□□□□□ -0.18
CPSF7-201ENST00000340437 TRIM64BA6NI03 449 aa13.93□□□□□ -0.18
CPSF7-201ENST00000340437 H7C0S8 307 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms