RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 CLDN2P57739 230 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 IL1RL1Q01638 556 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 ILF2Q12905 390 aaKnown RBP12.16□□□□□ -0.46
LIMK1-201ENST00000336180 PIP5KL1Q5T9C9 394 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 ZDHHC20Q5W0Z9 365 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 XKR5Q6UX68 686 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 ADCK2Q7Z695 626 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 TICAM1Q8IUC6 712 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 OR7G3Q8NG95 312 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 MAL2Q969L2 176 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 GBP5Q96PP8 586 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 CCM2LQ9NUG4 571 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-201ENST00000336180 EXD2Q9NVH0 621 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 SMOXQ9NWM0 555 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 DKK3Q9UBP4 350 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 ANAPC2Q9UJX6 822 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 PNMA8BQ9ULN7 279 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-201ENST00000336180 FADS3Q9Y5Q0 445 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 WASHC1A8K0Z3 465 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 H0Y8X5 98 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 ZNF682O95780 498 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 MPC1LP0DKB6 136 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 CDH1P12830 882 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 JAK1P23458 1154 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 CLCNKAP51800 687 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 WASH2PQ6VEQ5 465 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 ERMP1Q7Z2K6 904 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 GPR149Q86SP6 731 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 OR5AK3PQ8NH89 298 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 NETO1Q8TDF5 533 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 EFHD1Q9BUP0 239 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 CLMPQ9H6B4 373 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 IMP3Q9NV31 184 aaKnown RBP12.16□□□□□ -0.46
LIMK1-201ENST00000336180 CUEDC1Q9NWM3 386 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-201ENST00000336180 WDR37Q9Y2I8 494 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 TCRBV5S2A0A599 114 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 TSPAN11A1L157 253 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 RFXANKO14593 260 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 PPM1DO15297 605 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 LILRB5O75023 590 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 PRKD3O94806 890 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 JUPP14923 745 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 FASP25445 335 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 CHN2P52757 468 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 DCDC1P59894 354 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 CST6Q15828 149 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 PRMT9Q6P2P2 845 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 FAM47BQ8NA70 645 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 ADCY4Q8NFM4 1077 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 ITCHQ96J02 903 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 PANX1Q96RD7 426 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 TAC3Q9UHF0 121 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 ANXA4P09525 319 aaPredicted RBP12.15□□□□□ -0.46
LIMK1-201ENST00000336180 TCF3P15923 654 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 SPIDRQ14159 915 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 UGT8Q16880 541 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 ZCCHC8Q6NZY4 707 aaKnown RBP12.15□□□□□ -0.46
LIMK1-201ENST00000336180 ZNF557Q8N988 423 aaPredicted RBP12.15□□□□□ -0.46
LIMK1-201ENST00000336180 FBXL8Q96CD0 374 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 FAM120BQ96EK7 910 aaKnown RBP12.15□□□□□ -0.46
LIMK1-201ENST00000336180 SMURF2Q9HAU4 748 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 VPS29Q9UBQ0 182 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 DPP7Q9UHL4 492 aa12.15□□□□□ -0.46
LIMK1-201ENST00000336180 COL4A3Q01955 1670 aa12.15□□□□□ -0.47
LIMK1-201ENST00000336180 SNAP29O95721 258 aa12.15□□□□□ -0.47
LIMK1-201ENST00000336180 ENO2P09104 434 aaPredicted RBP12.15□□□□□ -0.47
LIMK1-201ENST00000336180 PIM1P11309 404 aaPredicted RBP12.15□□□□□ -0.47
LIMK1-201ENST00000336180 NPPBP16860 134 aa12.15□□□□□ -0.47
LIMK1-201ENST00000336180 HNMTP50135 292 aa12.15□□□□□ -0.47
LIMK1-201ENST00000336180 ELP6Q0PNE2 266 aa12.15□□□□□ -0.47
LIMK1-201ENST00000336180 LCN8Q6JVE9 175 aa12.15□□□□□ -0.47
LIMK1-201ENST00000336180 GALNT15Q8N3T1 639 aa12.15□□□□□ -0.47
LIMK1-201ENST00000336180 CPA6Q8N4T0 437 aa12.15□□□□□ -0.47
LIMK1-201ENST00000336180 CIDECQ96AQ7 238 aaPredicted RBP12.15□□□□□ -0.47
LIMK1-201ENST00000336180 TRIM39Q9HCM9 518 aa12.15□□□□□ -0.47
LIMK1-201ENST00000336180 SERHLQ9NQF3 203 aa12.15□□□□□ -0.47
LIMK1-201ENST00000336180 FBXL12Q9NXK8 326 aa12.15□□□□□ -0.47
LIMK1-201ENST00000336180 HOXB3P14651 431 aaPredicted RBP12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TNFRSF1BP20333 461 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 AP1S2P56377 157 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 ZNF852Q6ZMS4 543 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 GPR180Q86V85 440 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 UCN3Q969E3 161 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TIFAQ96CG3 184 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 PPP1R16AQ96I34 528 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 OSBPL10Q9BXB5 764 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 PAIP1Q9H074 479 aaKnown RBP12.14□□□□□ -0.47
LIMK1-201ENST00000336180 AASSQ9UDR5 926 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 MUC3AQ02505 3323 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TBC1D3DA0A087WVF3 549 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TBC1D3IA0A087WXS9 549 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TBC1D3EA0A087X179 549 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TBC1D3KA0A087X1G2 549 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TBC1D3FA6NER0 549 aaPredicted RBP12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TBC1D3LB9A6J9 549 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 C1QTNF3-AMACRE9PGA6 284 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 FPGTO14772 594 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TPPPO94811 219 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 SERPINA1P01009 418 aa12.14□□□□□ -0.47
LIMK1-201ENST00000336180 TBC1D3HP0C7X1 549 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms