RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 PPM1MQ96MI6 270 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 TRIB3Q96RU7 358 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 VN1R3Q9BXE9 311 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 UTS2RQ9UKP6 389 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 STX16-NPEPL1H3BU86 382 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 STX16O14662 325 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 SUV39H1O43463 412 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 F3P13726 295 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 TRMT5Q32P41 509 aaKnown RBP8.97□□□□□ -0.97
PTPRE-202ENST00000306042 GCNT6Q5T4J0 391 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 C10orf62Q5T681 223 aaPredicted RBP8.97□□□□□ -0.97
PTPRE-202ENST00000306042 C1orf189Q5VU69 101 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 TRAF7Q6Q0C0 670 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 FAM160A2Q8N612 972 aaPredicted RBP8.97□□□□□ -0.97
PTPRE-202ENST00000306042 SEC14L1Q92503 715 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 WBP2Q969T9 261 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 TMEM74Q96NL1 305 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 RBCK1Q9BYM8 510 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 PRTFDC1Q9NRG1 225 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 CPNE7Q9UBL6 633 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 CLEC4EQ9ULY5 219 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 OARD1Q9Y530 152 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 E7EQ34 232 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 DLX3O60479 287 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 COQ9O75208 318 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 TBX10O75333 385 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 NR2F6P10588 404 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 PRPS1L1P21108 318 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 PAICSP22234 425 aaKnown RBP8.97□□□□□ -0.97
PTPRE-202ENST00000306042 AQP1P29972 269 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 DEFB134Q4QY38 66 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 LSMEM2Q8N112 164 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 PHF10Q8WUB8 498 aaKnown RBP8.97□□□□□ -0.97
PTPRE-202ENST00000306042 C6orf106Q9H6K1 298 aaPredicted RBP8.97□□□□□ -0.97
PTPRE-202ENST00000306042 LYARQ9NX58 379 aaKnown RBP8.97□□□□□ -0.97
PTPRE-202ENST00000306042 PISDQ9UG56 409 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 ANAPC2Q9UJX6 822 aa8.97□□□□□ -0.97
PTPRE-202ENST00000306042 EIF3FO00303 357 aaPredicted RBP8.96□□□□□ -0.97
PTPRE-202ENST00000306042 MANBAO00462 879 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 IL6P05231 212 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 ALOX5P09917 674 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 PRSS56P0CW18 603 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 IMPDH2P12268 514 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 PGFP49763 221 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 TAS2R41P59536 307 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 LEXMQ3ZCV2 418 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 OTUD3Q5T2D3 398 aaPredicted RBP8.96□□□□□ -0.97
PTPRE-202ENST00000306042 RAB43Q86YS6 212 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 OR2T12Q8NG77 320 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 SMPDL3BQ92485 455 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 RPP25Q9BUL9 199 aaKnown RBP8.96□□□□□ -0.97
PTPRE-202ENST00000306042 TAPBPLQ9BX59 468 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 RNF11Q9Y3C5 154 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 HS3ST3A1Q9Y663 406 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 LOC285095A0A1B0GVY8 99 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 AURKAO14965 403 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 CDC123O75794 336 aaPredicted RBP8.96□□□□□ -0.97
PTPRE-202ENST00000306042 RNH1P13489 461 aaKnown RBP8.96□□□□□ -0.97
PTPRE-202ENST00000306042 BMP7P18075 431 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 CD9P21926 228 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 NUBP1P53384 320 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 RGS8P57771 180 aaPredicted RBP8.96□□□□□ -0.97
PTPRE-202ENST00000306042 TAF13Q15543 124 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 FAM174BQ3ZCQ3 159 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 PLEKHM3Q6ZWE6 761 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 PDZD3Q86UT5 571 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 ARL14Q8N4G2 192 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 SMRP1Q8NCR6 262 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 OR5AR1Q8NGP9 310 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 KLHL6Q8WZ60 621 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 RNF31Q96EP0 1072 aa8.96□□□□□ -0.97
PTPRE-202ENST00000306042 MYCBPQ99417 103 aaPredicted RBP8.96□□□□□ -0.97
PTPRE-202ENST00000306042 MAGEB17A8MXT2 336 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 FHP07954 510 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 RPS3P23396 243 aaKnown RBP eCLIP8.96□□□□□ -0.98
PTPRE-202ENST00000306042 MMP12P39900 470 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 KHKP50053 298 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 ADPRHP54922 357 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 ERVK-8P63133 956 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 NR1D2Q14995 579 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 HERC3Q15034 1050 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 ERICH5Q6P6B1 374 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 MACC1Q6ZN28 852 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 Q6ZS52 159 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 ZBTB49Q6ZSB9 765 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 ALYREFQ86V81 257 aaKnown RBP8.96□□□□□ -0.98
PTPRE-202ENST00000306042 PEX5LQ8IYB4 626 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 MRGPRX1Q96LB2 322 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 DEFB126Q9BYW3 111 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 IL37Q9NZH6 218 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 CNOT6Q9ULM6 557 aaKnown RBP8.96□□□□□ -0.98
PTPRE-202ENST00000306042 LOXHD1Q8IVV2 1947 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 TRIP12Q14669 1992 aaPredicted RBP8.96□□□□□ -0.98
PTPRE-202ENST00000306042 FAM92AA1XBS5 289 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 TMEM221A6NGB7 291 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 M0R296 226 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 CHRNGP07510 517 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 OTX2P32243 289 aa8.96□□□□□ -0.98
PTPRE-202ENST00000306042 CDKN1CP49918 316 aaPredicted RBP8.96□□□□□ -0.98
PTPRE-202ENST00000306042 TCTN1Q2MV58 587 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms