RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 FAM53CQ9NYF3 392 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 CLEC1BQ9P126 229 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 COG5Q9UP83 839 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 ICKQ9UPZ9 632 aa4.28□□□□□ -1.72
NCOA1-201ENST00000288599 PCYT1BQ9Y5K3 369 aaPredicted RBP4.28□□□□□ -1.72
NCOA1-201ENST00000288599 LRP6O75581 1613 aa4.28□□□□□ -1.73
NCOA1-201ENST00000288599 NID2Q14112 1375 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 IRGMA1A4Y4 181 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 DNASE2O00115 360 aaPredicted RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 TBL1XO60907 577 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 MAT2AP31153 395 aaKnown RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 DLSTP36957 453 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 MNX1P50219 401 aaPredicted RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 TGFB2P61812 414 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 TEKQ02763 1124 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 NTRK2Q16620 822 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 BTBD16Q32M84 506 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 RFX4Q33E94 735 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 NXPE4Q6UWF7 544 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 METTL7BQ6UX53 244 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 ABHD13Q7L211 337 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 NPAS4Q8IUM7 802 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 EGFL6Q8IUX8 553 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 MB21D2Q8IYB1 491 aaPredicted RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 SLC44A3Q8N4M1 653 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 WDR31Q8NA23 367 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 STT3BQ8TCJ2 826 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 KAT2AQ92830 837 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 TRMT2BQ96GJ1 504 aaKnown RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 HSPA12BQ96MM6 686 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 MCEEQ96PE7 176 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 TMEM117Q9H0C3 514 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 ARL6Q9H0F7 186 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 PCDHAC1Q9H158 963 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 DCLRE1BQ9H816 532 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 MKKSQ9NPJ1 570 aaPredicted RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 PIH1D1Q9NWS0 290 aaKnown RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 TAS2R16Q9NYV7 291 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 RARRES3Q9UL19 164 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 PCDHA6Q9UN73 950 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 CORO2BQ9UQ03 480 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 C14orf166Q9Y224 244 aaKnown RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 SLC5A6Q9Y289 635 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 PCDHA3Q9Y5H8 950 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 URGCP-MRPS24S4R325 110 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 A0A1B0GUL6 1792 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 ZNF335Q9H4Z2 1342 aaPredicted RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 ZNF785A8K8V0 405 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 CCDC188H7C350 402 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 M0R036 132 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 HS3ST1O14792 307 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 SLC16A3O15427 465 aaKnown RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 CDC14BO60729 498 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 SLC25A14O95258 325 aaPredicted RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 NPPBP16860 134 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 SLC1A3P43003 542 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 CX3CR1P49238 355 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 SERPINB9P50453 376 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 ENPEPQ07075 957 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 TARDBPQ13148 414 aaKnown RBP eCLIP4.27□□□□□ -1.732e-6■■■■□ 21.8
NCOA1-201ENST00000288599 DOC2BQ14184 412 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 TBRG1Q3YBR2 411 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 ENPP6Q6UWR7 440 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 GLT6D1Q7Z4J2 308 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 LRRC34Q8IZ02 419 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 DNERQ8NFT8 737 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 DYNLRB2Q8TF09 96 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 HDAC10Q969S8 669 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 SEC22AQ96IW7 307 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 GJD4Q96KN9 370 aaPredicted RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 PGLYRP2Q96PD5 576 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 AGAP2Q99490 1192 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 CRISPLD1Q9H336 500 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 FAM105AQ9NUU6 356 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 EMC3Q9P0I2 261 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 PCDHGA2Q9Y5H1 932 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 RIC1Q4ADV7 1423 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 C17orf113A0A1B0GUU1 675 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 MDM4O15151 490 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 IFNA4P05014 189 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 FHP07954 510 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 SAGP10523 405 aaPredicted RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 UCHL3P15374 230 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 TBPP20226 339 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 RPL10P27635 214 aaKnown RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 NR0B1P51843 470 aaKnown RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 AP3S2P59780 193 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 GINS1Q14691 196 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 BOLA3Q53S33 107 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 CRTC1Q6UUV9 634 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 DENND5BQ6ZUT9 1274 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 CHST9Q7L1S5 443 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 KCNK18Q7Z418 384 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 MCATQ8IVS2 390 aaKnown RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 MINDY2Q8NBR6 621 aa4.27□□□□□ -1.73
NCOA1-201ENST00000288599 H1FXQ92522 213 aaKnown RBP4.27□□□□□ -1.73
NCOA1-201ENST00000288599 CCDC120Q96HB5 630 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms