RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 KCNA10Q16322 511 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 DUOXA1Q1HG43 343 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 FAHD1Q6P587 224 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 CCDC103Q8IW40 242 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 SPATA17Q96L03 361 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 Q96MT0 163 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 TTPALQ9BTX7 342 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 RAD18Q9NS91 495 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 A6NL46 340 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 HSMCR30P0CW71 290 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 RRM2P31350 389 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 IDH2P48735 452 aaKnown RBP26.63■■□□□ 1.85
CBX4-201ENST00000269397 HNRNPFP52597 415 aaKnown RBP26.63■■□□□ 1.85
CBX4-201ENST00000269397 NOXRED1Q6NXP6 359 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 NEK10Q6ZWH5 1172 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 CBLL1Q75N03 491 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 TESMINQ9Y4I5 508 aa26.63■■□□□ 1.85
CBX4-201ENST00000269397 GLYATL1P3A0A0U1RQE8 302 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 OR6C75A6NL08 312 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 MAGEB17A8MXT2 336 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 ASNA1O43681 348 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 TLL1O43897 1013 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 NUAK1O60285 661 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 PRAMEF4O60810 478 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 UGT8Q16880 541 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 ZNF181Q2M3W8 571 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 PRAMEF9Q5VWM5 478 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 RNF165Q6ZSG1 346 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 SLC24A5Q71RS6 500 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 EIF3MQ7L2H7 374 aaKnown RBP26.62■■□□□ 1.85
CBX4-201ENST00000269397 OR52J3Q8NH60 311 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 PITX2Q99697 317 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 SNX6Q9UNH7 406 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 ISPDA4D126 451 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 SSX4O60224 188 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 C9P02748 559 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 ITGA1P56199 1179 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 TUBA1BP68363 451 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 NEK5Q6P3R8 708 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 TUBA1AQ71U36 451 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 SYT12Q8IV01 421 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 ELMOD1Q8N336 334 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 HRASLS5Q96KN8 279 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 CHCHD6Q9BRQ6 235 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 CENPOQ9BU64 300 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 HOXD1Q9GZZ0 328 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.62■■□□□ 1.854e-7■■■■□ 25.9
CBX4-201ENST00000269397 RNF38Q9H0F5 515 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 MARCH7Q9H992 704 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 INPPL1O15357 1258 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 ADAM12O43184 909 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 SMAD6O43541 496 aaKnown RBP26.62■■□□□ 1.85
CBX4-201ENST00000269397 STSP08842 583 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 HOXB6P17509 224 aaKnown RBP26.62■■□□□ 1.85
CBX4-201ENST00000269397 CRYBA2P53672 197 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 IFITM2Q01629 132 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 TAS1R1Q7RTX1 841 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 CYP2U1Q7Z449 544 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 TSPAN33Q86UF1 283 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 METTL4Q8N3J2 472 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 GGHQ92820 318 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 TAS2R16Q9NYV7 291 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 SLC22A14Q9Y267 594 aa26.62■■□□□ 1.85
CBX4-201ENST00000269397 AMD1P17707 334 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 RPL17P18621 184 aaKnown RBP26.61■■□□□ 1.85
CBX4-201ENST00000269397 HNF1BP35680 557 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 HSPA14Q0VDF9 509 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 PTCHD3Q3KNS1 767 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 ADGRF1Q5T601 910 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 ANKS3Q6ZW76 656 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 CELF2-AS1Q8N7Q2 184 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 ATL1Q8WXF7 558 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 FEVQ99581 238 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 KLHL3Q9UH77 587 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 PSORS1C1Q9UIG5 152 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 COX7A2P14406 83 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 GJA8P48165 433 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 WNT3P56703 355 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 ELP6Q0PNE2 266 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 TP53BP2Q13625 1128 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 DDX39BQ13838 428 aaKnown RBP26.61■■□□□ 1.85
CBX4-201ENST00000269397 IQCCQ4KMZ1 466 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 CMTM7Q96FZ5 175 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 RLIMQ9NVW2 624 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 MBD1Q9UIS9 605 aaPredicted RBP26.61■■□□□ 1.85
CBX4-201ENST00000269397 BTBD3Q9Y2F9 522 aa26.61■■□□□ 1.85
CBX4-201ENST00000269397 TAF4O00268 1085 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 TBL1XO60907 577 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 BMPR1AP36894 532 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 CCBE1Q6UXH8 406 aaPredicted RBP26.6■■□□□ 1.85
CBX4-201ENST00000269397 USP43Q70EL4 1123 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 UBE2R2Q712K3 238 aaPredicted RBP26.6■■□□□ 1.85
CBX4-201ENST00000269397 FAM124AQ86V42 546 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 NLGN4XQ8N0W4 816 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 AMER2Q8N7J2 671 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 WFDC5Q8TCV5 224 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 ZNF675Q8TD23 568 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 C7orf34Q96L11 122 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 ATG10Q9H0Y0 220 aa26.6■■□□□ 1.85
CBX4-201ENST00000269397 NMRK2Q9NPI5 230 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms