RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 CCDC187A0A096LP49 1063 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 H7BY64 318 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 OR7A17O14581 309 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 SRPX2O60687 465 aaPredicted RBP13.69□□□□□ -0.22
SSBP1-201ENST00000265304 CTSVO60911 334 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 PVRP15151 417 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 EZRP15311 586 aaKnown RBP13.69□□□□□ -0.22
SSBP1-201ENST00000265304 GSTM2P28161 218 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 GCGRP47871 477 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 CLCQ05315 142 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 ASPHQ12797 758 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 TRAF3Q13114 568 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 IL11RAQ14626 422 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 FBXO48Q5FWF7 155 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 THEMIS2Q5TEJ8 643 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 LIPJQ5W064 366 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 GOLGA7Q7Z5G4 137 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 TAX1BP1Q86VP1 789 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 HOMEZQ8IX15 550 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 TEX9Q8N6V9 391 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 GOLGA6L1Q8N7Z2 621 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 OR8K5Q8NH50 307 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 TM4SF19Q96DZ7 209 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 PRR11Q96HE9 360 aaPredicted RBP13.69□□□□□ -0.22
SSBP1-201ENST00000265304 PRAP1Q96NZ9 151 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 OR2A5Q96R48 311 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 ZNF382Q96SR6 550 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 CMKLR1Q99788 373 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 EFCAB11Q9BUY7 163 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 GATA5Q9BWX5 397 aaPredicted RBP13.69□□□□□ -0.22
SSBP1-201ENST00000265304 RHBGQ9H310 441 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 IPPKQ9H8X2 491 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 PDE7BQ9NP56 450 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 PSD3Q9NYI0 1048 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 ZNF225Q9UK10 706 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 PPT2Q9UMR5 302 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 DYRK1BQ9Y463 629 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 PCDHGA3Q9Y5H0 932 aa13.69□□□□□ -0.22
SSBP1-201ENST00000265304 CHD8Q9HCK8 2581 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 TRBC2A0A5B9 178 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 FITM1A5D6W6 292 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 NPHS1O60500 1241 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 CCNT2O60583 730 aaKnown RBP13.68□□□□□ -0.22
SSBP1-201ENST00000265304 RASSF9O75901 435 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 MLYCDO95822 493 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 FGF3P11487 239 aaPredicted RBP13.68□□□□□ -0.22
SSBP1-201ENST00000265304 FGF5P12034 268 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 CDH1P12830 882 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 JUPP14923 745 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 CD22P20273 847 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 CXCR2P25025 360 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 MPSTP25325 297 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 CSTF2P33240 577 aaKnown RBP eCLIP13.68□□□□□ -0.22
SSBP1-201ENST00000265304 AHRP35869 848 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 HNF4AP41235 474 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 NAGLUP54802 743 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 EMP3P54852 163 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 REEP5Q00765 189 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 ACY1Q03154 408 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 TARDBPQ13148 414 aaKnown RBP eCLIP13.68□□□□□ -0.22
SSBP1-201ENST00000265304 LAPTM5Q13571 262 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 DOC2AQ14183 400 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 RTP5Q14D33 572 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 ZC3H12BQ5HYM0 836 aaKnown RBP13.68□□□□□ -0.22
SSBP1-201ENST00000265304 MANEAQ5SRI9 462 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 CATSPEREQ5SY80 951 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 C10orf62Q5T681 223 aaPredicted RBP13.68□□□□□ -0.22
SSBP1-201ENST00000265304 FRMD7Q6ZUT3 714 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 FAM20CQ8IXL6 584 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 LAS2Q8IYD9 372 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 CHCHD4Q8N4Q1 142 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 WDR36Q8NI36 951 aaKnown RBP13.68□□□□□ -0.22
SSBP1-201ENST00000265304 RAB3IL1Q8TBN0 382 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 ZNF501Q96CX3 271 aaPredicted RBP13.68□□□□□ -0.22
SSBP1-201ENST00000265304 PTCD3Q96EY7 689 aaKnown RBP13.68□□□□□ -0.22
SSBP1-201ENST00000265304 CNDP1Q96KN2 507 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 MAGEB10Q96LZ2 347 aaPredicted RBP13.68□□□□□ -0.22
SSBP1-201ENST00000265304 SPRY4Q9C004 299 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 NRSN2Q9GZP1 204 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 KCNK9Q9NPC2 374 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 GEMIN8Q9NWZ8 242 aaKnown RBP13.68□□□□□ -0.22
SSBP1-201ENST00000265304 STK38LQ9Y2H1 464 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 SDK2Q58EX2 2172 aa13.68□□□□□ -0.22
SSBP1-201ENST00000265304 E7EQ34 232 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 H0YIV9 168 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 CLGNO14967 610 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 HCRTR1O43613 425 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 PRAMEF10O60809 474 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 H2AFYO75367 372 aaKnown RBP13.67□□□□□ -0.22
SSBP1-201ENST00000265304 DXOO77932 396 aaKnown RBP13.67□□□□□ -0.22
SSBP1-201ENST00000265304 SNUPNO95149 360 aaKnown RBP13.67□□□□□ -0.22
SSBP1-201ENST00000265304 FGF4P08620 206 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 EBLN1P0CF75 366 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 FOLR1P15328 257 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 GRK2P25098 689 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 SCTRP47872 440 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 PKNOX1P55347 436 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 RPS15AP62244 130 aaKnown RBP13.67□□□□□ -0.22
SSBP1-201ENST00000265304 PPP2R2AP63151 447 aa13.67□□□□□ -0.22
SSBP1-201ENST00000265304 LCP2Q13094 533 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms