RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 GDF15Q99988 308 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 CDCA4Q9BXL8 241 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 P2RY12Q9H244 342 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 PDFQ9HBH1 243 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 FARSBQ9NSD9 589 aaKnown RBP12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 GIMAP4Q9NUV9 329 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 IMPAD1Q9NX62 359 aa12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 CNOT2Q9NZN8 540 aaKnown RBP12.02□□□□□ -0.49
CHMP2B-201ENST00000263780 BPTFQ12830 3046 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 SH3D21A4FU49 640 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 ARL5CA6NH57 179 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 M0QZQ0 153 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 CTDSP2O14595 271 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 MPZL2O60487 215 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 KCNK5O95279 499 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 GUCA1CO95843 209 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 PTHP01270 115 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 ERP29P30040 261 aaKnown RBP12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 KIR3DL1P43629 444 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 SRSF11Q05519 484 aaKnown RBP12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 CACNG1Q06432 222 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 GPAT3Q53EU6 434 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 VTCN1Q7Z7D3 282 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 SCN4BQ8IWT1 228 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 RAVER1Q8IY67 606 aaKnown RBP12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 OR10T2Q8NGX3 314 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 SLC7A6Q92536 515 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 C8orf48Q96LL4 319 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 WDFY2Q96P53 400 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 TTYH2Q9BSA4 534 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 TSEN34Q9BSV6 310 aaKnown RBP12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 ZBED2Q9BTP6 218 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 MAGEH1Q9H213 219 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 TMEM245Q9H330 911 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 RETREG1Q9H6L5 497 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 TLR8Q9NR97 1041 aaKnown RBP12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 SIRT5Q9NXA8 310 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 MIOSQ9NXC5 875 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 GPR83Q9NYM4 423 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 SNX8Q9Y5X2 465 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 A8MVJ9 347 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 LOC730098B7Z3J9 87 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 TREHO43280 583 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 SUV39H1O43463 412 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 SSX4O60224 188 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 CLDN9O95484 217 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 CTPS1P17812 591 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 ENGP17813 658 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 M6PRP20645 277 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 PKLRP30613 574 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 MLLT3P42568 568 aaPredicted RBP12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 IL12RB1P42701 662 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 RORCP51449 518 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 ANKRD46Q86W74 232 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 LIX1LQ8IVB5 337 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 CMTM7Q96FZ5 175 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 RNF170Q96K19 258 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 MGLLQ99685 303 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 RNF167Q9H6Y7 350 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 ACOXLQ9NUZ1 547 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 ELOVL2Q9NXB9 296 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 PADI2Q9Y2J8 665 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 KLHL20Q9Y2M5 609 aa12.01□□□□□ -0.49
CHMP2B-201ENST00000263780 GBF1Q92538 1859 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 SLC35F4A4IF30 521 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 M0QZ92 97 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 HAS3O00219 553 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 TNFRSF11BO00300 401 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 FPGTO14772 594 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 RGS5O15539 181 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 PRMT3O60678 531 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 ITGB1P05556 798 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 ZNF7P17097 686 aaPredicted RBP12□□□□□ -0.49
CHMP2B-201ENST00000263780 CDKN2CP42773 168 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 RFX2P48378 723 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 IDH2P48735 452 aaKnown RBP12□□□□□ -0.49
CHMP2B-201ENST00000263780 PSEN2P49810 448 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 EFEMP1Q12805 493 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 ASAH1Q13510 395 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 DMC1Q14565 340 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 LRRC66Q68CR7 880 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 LPCAT1Q8NF37 534 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 ELMO1Q92556 727 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 C7orf34Q96L11 122 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 NEDD4LQ96PU5 975 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 ZNF556Q9HAH1 456 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 AMBNQ9NP70 447 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 UBA2Q9UBT2 640 aaPredicted RBP12□□□□□ -0.49
CHMP2B-201ENST00000263780 DUSP12Q9UNI6 340 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 MAPRE3Q9UPY8 281 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 CORO2BQ9UQ03 480 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 LTBP3Q9NS15 1303 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 TRIM3O75382 744 aaPredicted RBP12□□□□□ -0.49
CHMP2B-201ENST00000263780 TYMPP19971 482 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 PRPS1L1P21108 318 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 PPIBP23284 216 aaKnown RBP12□□□□□ -0.49
CHMP2B-201ENST00000263780 PRPH2P23942 346 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 CA8P35219 290 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 NUDT1P36639 197 aa12□□□□□ -0.49
CHMP2B-201ENST00000263780 TSTQ16762 297 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms