RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 AQP1P29972 269 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 PPP2R1BP30154 601 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 ASAH1Q13510 395 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 CES5AQ6NT32 575 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 ENPP6Q6UWR7 440 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 OR1M1Q8NGA1 313 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 OR6M1Q8NGM8 313 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 TMEM125Q96AQ2 219 aa12.54□□□□□ -0.4
VAMP4-201ENST00000236192 TMEM150BA6NC51 233 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 LRRN3E7EW58 273 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 PCDH17O14917 1159 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 C1RP00736 705 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 TFP02787 698 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 DCTP40126 519 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CSKP41240 450 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CLK2P49760 499 aaKnown RBP12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CNTN2Q02246 1040 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 C22orf42Q6IC83 251 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 DOK6Q6PKX4 331 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 MACC1Q6ZN28 852 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 ADGRG3Q86Y34 549 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 ZNF454Q8N9F8 522 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 ATP6V1C2Q8NEY4 427 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CCDC107Q8WV48 283 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 C3orf49Q96BT1 292 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CNTNAP3BQ96NU0 1288 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 TCF25Q9BQ70 676 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 C7orf50Q9BRJ6 194 aaKnown RBP12.53□□□□□ -0.4
VAMP4-201ENST00000236192 WDR18Q9BV38 432 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 LRRN3Q9H3W5 708 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 SLAMF7Q9NQ25 335 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CYB5R1Q9UHQ9 305 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CERS1P27544 350 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 OMPP47874 163 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 GRIK2Q13002 908 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 HEPACAMQ14CZ8 416 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 LIPKQ5VXJ0 399 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 TEX261Q6UWH6 196 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 ZPBP2Q6X784 338 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 ENTHD1Q8IYW4 607 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 LIX1Q8N485 282 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 PARK7Q99497 189 aaKnown RBP12.53□□□□□ -0.4
VAMP4-201ENST00000236192 TRAF4Q9BUZ4 470 aaPredicted RBP12.53□□□□□ -0.4
VAMP4-201ENST00000236192 C1QTNF7Q9BXJ2 289 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CACNG6Q9BXT2 260 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 SEMA3GQ9NS98 782 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 SLCO3A1Q9UIG8 710 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 U3KQ87 197 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 TRAPPC13A5PLN9 417 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 GADD45GO95257 159 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 PCSK2P16519 638 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CBLP22681 906 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 PIK3CBP42338 1070 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 SLC1A2P43004 574 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 KIR3DL1P43629 444 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 ATXN1P54253 815 aaKnown RBP12.53□□□□□ -0.4
VAMP4-201ENST00000236192 SPHARQ15513 63 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 ANXA8L1Q5VT79 327 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 MOCOSQ96EN8 888 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 SMARCD1Q96GM5 515 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 ZBED3Q96IU2 234 aaPredicted RBP12.53□□□□□ -0.4
VAMP4-201ENST00000236192 HSPA12BQ96MM6 686 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 C8orf33Q9H7E9 229 aaPredicted RBP12.53□□□□□ -0.4
VAMP4-201ENST00000236192 RNF146Q9NTX7 359 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 ZNF70Q9UC06 446 aaPredicted RBP12.53□□□□□ -0.4
VAMP4-201ENST00000236192 C4AP0C0L4 1744 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 C4BP0C0L5 1744 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CBX4O00257 560 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 B4GALT4O60513 344 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 MATN4O95460 622 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
VAMP4-201ENST00000236192 MAN2A2P49641 1150 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 RENBPP51606 427 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CACNB3P54284 484 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 KCNC4Q03721 635 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CATSPEREQ5SY80 951 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 GMCL1P1Q8NEA9 526 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 ACOT12Q8WYK0 555 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 RFKQ969G6 155 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 KLHL5Q96PQ7 755 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 IL4I1Q96RQ9 567 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 SPON2Q9BUD6 331 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.53□□□□□ -0.4
VAMP4-201ENST00000236192 ABCD2Q9UBJ2 740 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 KIF25Q9UIL4 384 aa12.53□□□□□ -0.4
VAMP4-201ENST00000236192 MMP20O60882 483 aa12.52□□□□□ -0.4
VAMP4-201ENST00000236192 BBOX1O75936 387 aa12.52□□□□□ -0.4
VAMP4-201ENST00000236192 KRBOX4Q5JUW0 171 aa12.52□□□□□ -0.4
VAMP4-201ENST00000236192 CLLU1Q5K131 121 aa12.52□□□□□ -0.4
VAMP4-201ENST00000236192 EIF5AL1Q6IS14 154 aaKnown RBP12.52□□□□□ -0.4
VAMP4-201ENST00000236192 C17orf107Q6ZR85 190 aa12.52□□□□□ -0.4
VAMP4-201ENST00000236192 FAM46DQ8NEK8 389 aa12.52□□□□□ -0.4
VAMP4-201ENST00000236192 NELL2Q99435 816 aa12.52□□□□□ -0.4
VAMP4-201ENST00000236192 FAM126AQ9BYI3 521 aaPredicted RBP12.52□□□□□ -0.4
VAMP4-201ENST00000236192 NAALAD2Q9Y3Q0 740 aa12.52□□□□□ -0.4
VAMP4-201ENST00000236192 RIMS1Q86UR5 1692 aaKnown RBP12.52□□□□□ -0.4
VAMP4-201ENST00000236192 C2CD4BA6NLJ0 364 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 SRPRAP08240 638 aaKnown RBP12.52□□□□□ -0.41
VAMP4-201ENST00000236192 CTBP2P56545 445 aa12.52□□□□□ -0.41
VAMP4-201ENST00000236192 GPR162Q16538 588 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms