RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Upk1bQ9Z2C6 260 aa9.47□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Kctd14A0A0U1RNG7 287 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Rpl7a-ps3A0A140T8L1 270 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 A0A286YD17 136 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gm16506F7ANP4 213 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 FiglaO55208 194 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 LdhcP00342 332 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cyp21P03940 487 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gja1P23242 382 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Pax3P24610 479 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 TshrP47750 764 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Epb42P49222 691 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Dsc3P55850 896 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Snrpd1P62315 119 aaKnown RBP9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Mmp11Q02853 492 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 GaltQ03249 379 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zdhhc11Q14AK4 347 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Hk3Q3TRM8 922 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Nfatc2Q60591 927 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Shkbp1Q6P7W2 704 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Clec7aQ6QLQ4 244 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Zfp438Q8BFX2 798 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Spon2Q8BMS2 330 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ptpn7Q8BUM3 359 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Lsm1Q8VC85 133 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Gpr37l1Q99JG2 481 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Sesn3Q9CYP7 492 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Fam96aQ9DCL2 160 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Ern1Q9EQY0 977 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Baz2bA2AUY4 2123 aa9.46□□□□□ -0.89
Pcdh1-201ENSMUST00000057185 Cd300ld2A2A7W0 305 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Dlgap4B1AZP2 992 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Kif28pD3YXS5 1028 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm8334F7CD45 553 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm9857F7CXR1 130 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Serpinb9cI7HJI5 387 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cyp1a1P00184 524 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 P01810 119 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Hmga1P17095 107 aaKnown RBP9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Hnf1bP27889 558 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Rassf5Q5EBH1 413 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Armc5Q5EBP3 926 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ranbp10Q6VN19 620 aaKnown RBP9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Npas4Q8BGD7 802 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Zc3h14Q8BJ05 735 aaKnown RBP9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Itpk1Q8BYN3 419 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Sit1Q8C503 180 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Rnf208Q8K0W3 265 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 St7lQ8K4P7 559 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr985Q8VGB4 311 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Tmem246Q91YV9 403 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ilf2Q9CXY6 390 aaKnown RBP9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Trim13Q9CYB0 407 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Zfp773Q9CZ29 471 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Tmem53Q9D0Z3 276 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 HaghlQ9DB32 283 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 TesminQ9WTJ6 475 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm13088A2AGW6 460 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Izumo4D3Z690 227 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Glyatl3E9Q5L8 290 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr171G5E8J1 314 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm21897J3KMP5 500 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm21750L7N228 499 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 AlyrefO08583 255 aaKnown RBP9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ech1O35459 327 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Slc32a1O35633 525 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gtf2h4O70422 463 aaKnown RBP9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 H2-D1P14427 368 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Arhgap39P59281 1107 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Pla2g5P97391 137 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ica1P97411 478 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Rnf43Q5NCP0 784 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Laptm4aQ60961 233 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Sim1Q61045 765 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Fzd4Q61088 537 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Defb14Q7TNV9 67 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr814Q7TRH4 310 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ubash3bQ8BGG7 638 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 PstkQ8BP74 359 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Map2k7Q8CE90 535 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 D8Ertd738eQ8R1F0 94 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr729Q8VET4 323 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 NwcQ9CQI4 244 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Q9D1K7 174 aaKnown RBP9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Adam24Q9R160 761 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 NbnQ9R207 751 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Pcm1Q9R0L6 2025 aa9.46□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 AccsA2AIG8 502 aa9.45□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm17555F6U8B9 371 aa9.45□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Pld3O35405 488 aa9.45□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cd93O89103 644 aa9.45□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 P01669 111 aa9.45□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 P01673 111 aa9.45□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Csn1s1P19228 313 aa9.45□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Irf7P70434 457 aa9.45□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Zfp39Q02525 718 aa9.45□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cd300lgQ1ERP8 331 aa9.45□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 SctrQ5FWI2 447 aa9.45□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Slc29a2Q61672 456 aa9.45□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Chil6Q80W26 440 aa9.45□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 65.2 ms