RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Gm2022A0A1Y7VLT7 144 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Vmn2r102L7N279 857 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 ChkaO54804 453 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 TP20293 436 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Agxt2Q3UEG6 513 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ak5Q920P5 562 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dnajb4Q9D832 337 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm5493S4R2D1 92 aa11.68□□□□□ -0.54
Trim56-201ENSMUST00000054384 Rex2A2AWF2 685 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Barx2O08686 283 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Hoxb6P09023 224 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cd44P15379 778 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 RxrbP28704 520 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 DckP43346 260 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Rps14P62264 151 aaKnown RBP11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 AcdQ5EE38 416 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ei24Q61070 340 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 PeloQ80X73 385 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fignl1Q8BPY9 683 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Adnp2Q8CHC8 1165 aaKnown RBP11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Prrg2Q8R182 198 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tmed4Q8R1V4 227 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr165Q8VFA2 313 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Rcbtb2Q99LJ7 551 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr596F8VQ26 312 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 C1raQ8CG16 707 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 CtbsQ8R242 366 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 SelenomQ8VHC3 145 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Sec13Q9D1M0 322 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cyp4a29A0A087WPC3 509 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tsga10ipF7A1F0 157 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pbx3O35317 434 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dsc2P55292 902 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Plekhf1Q3TB82 279 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cdk10Q3UMM4 360 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Zfp866Q6PGD2 520 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tmem121Q80XA0 318 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tdp1Q8BJ37 609 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 MepceQ8K3A9 666 aaKnown RBP11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr1311Q8VET0 312 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Oas3Q8VI93 1138 aaKnown RBP11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Sertad2Q9JJG5 309 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr1480A0A140LIR8 359 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm266A6H634 200 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Sema6bO54951 886 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ptp4a2O70274 167 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 CenpcP49452 906 aaKnown RBP11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ubxn2bQ0KL01 331 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Rnase12Q5GAM8 145 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Adamts16Q69Z28 1222 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Acap1Q8K2H4 740 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr356Q8VFP5 315 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Col26a1Q91VF6 440 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Prdm9Q96EQ9 843 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 CmasQ99KK2 432 aaKnown RBP11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Kcnq4Q9JK97 696 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Phc2Q9QWH1 850 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Rdh11Q9QYF1 316 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Unc13cQ8K0T7 2210 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 TesP47226 423 aaKnown RBP11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lpcat4Q6NVG1 524 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Micu2Q8CD10 432 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dnm1lQ8K1M6 742 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fbxo33Q8VE08 562 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 St6galnac1Q9QZ39 526 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lypla2Q9WTL7 231 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ighg1P01869 393 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 SpnP15702 395 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 UradQ283N4 178 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Marveld2Q3UZP0 555 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Acvrl1Q61288 502 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Arl5aQ80ZU0 179 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fastkd3Q8BSN9 661 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pik3cbQ8BTI9 1064 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Apoa5Q8C7G5 368 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Edem1Q925U4 652 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cep41Q99NF3 373 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lin37Q9D8N6 246 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 TheglQ9DA15 459 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pmp22P16646 161 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Matn1P51942 500 aaKnown RBP11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lman2lP59481 347 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lrfn1Q2WF71 766 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ptx4Q6RUU0 478 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Spata33Q8C624 132 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pcdha2Q91Y17 948 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cers2Q924Z4 380 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Psma1Q9R1P4 263 aa11.67□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm6133B2RY53 190 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Bhlhe40O35185 411 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Mthfd2P18155 350 aaKnown RBP11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 FgbQ8K0E8 481 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pth2rQ91V95 546 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Uck2Q99PM9 261 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Vsig1Q9D2J4 407 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Otud4B2RRE7 1107 aaKnown RBP11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Armc4B2RY50 1037 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr1471F6QVZ8 314 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Rit1P70426 219 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Padi2Q08642 673 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 54.5 ms