RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ndufv2Q9D6J6 248 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Aph1cQ9DCZ9 258 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Scn8aQ9WTU3 1978 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ighv11-1A0A075B5R6 117 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Chil5A0A0G2JDS2 431 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 FanceB8JJD6 213 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gm10718D3Z1I7 227 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Klhl3E0CZ16 587 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cyp2b23E9Q593 491 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gm4788E9Q8B5 879 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cops4O88544 406 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 PfklP12382 780 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Rab12P35283 243 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Mkl2P59759 1080 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Dnaja1P63037 397 aaKnown RBP13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 GiprQ0P543 460 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Tapt1Q4VBD2 564 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gm2aQ60648 193 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Fam149b1Q6NSV7 578 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Hyal5Q812F3 526 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Zfp595Q8BIN6 625 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Slc45a1Q8BIV7 751 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cpne5Q8JZW4 593 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Vmn1r24Q8R2D6 296 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Mterf3Q8R3J4 412 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gtf2a1lQ8R4I4 468 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Mtfr2Q8VED8 361 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Olfr357Q8VFP4 308 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Coro6Q920M5 471 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cep97Q9CZ62 856 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 NtsQ9D3P9 169 aa13.06□□□□□ -0.32
Nup88-201ENSMUST00000035283 Xkr6E9Q6C8 638 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Smim18J3QNP2 93 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Hmox2O70252 315 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ctla2aP12399 137 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Arf5P84084 180 aaKnown RBP13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Spata6Q3U6K5 488 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Q3UK37 420 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 A630001G21RikQ3UTB2 229 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 MlipQ5FW52 269 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 C2cd4cC2CD4Q5HZI2 419 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gpr142Q7TQN9 365 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Scn3bQ8BHK2 215 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Clec9aQ8BRU4 238 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Guf1Q8C3X4 651 aaKnown RBP13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Q8C4P0 716 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ftsj1Q8CBC7 324 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Crlf2Q8CII9 359 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 B3gnt7Q8K0J2 397 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ly6g5cQ8K1T5 149 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Znf668Q8K2R5 619 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Il23rQ8K4B4 644 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 DhrsxQ8VBZ0 335 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 SharpinQ91WA6 380 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Psat1Q99K85 370 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Bbs2Q9CWF6 721 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Nectin3Q9JLB9 549 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Epm2aQ9WUA5 330 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Armc4B2RY50 1037 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Vmn2r22E9Q7S8 853 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ring1O35730 406 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cbx4O55187 551 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Tp63O88898 680 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Slc1a5P51912 553 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Plxna3P70208 1872 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 PrlrQ08501 608 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Naf1Q3UMQ8 489 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Kpna1Q60960 538 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 RhocQ62159 193 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gpalpp1Q69ZC8 346 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 1700001J03RikQ80ZR8 219 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gm4922Q8C0N0 497 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cers6Q8C172 384 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 SntnQ8C9X1 147 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Slc8a2Q8K596 921 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Irak4Q8R4K2 459 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Utp6Q8VCY6 597 aaKnown RBP13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Olfr398Q8VFY0 314 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 GhdcQ99J23 532 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 HadhbQ99JY0 475 aaKnown RBP13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 NepnQ9CQ76 512 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ola1Q9CZ30 396 aaKnown RBP13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ppil6Q9D6D8 278 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Pop5Q9DB28 169 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Rgs17Q9QZB0 210 aa13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 HnrnpfQ9Z2X1 415 aaKnown RBP13.05□□□□□ -0.32
Nup88-201ENSMUST00000035283 Atg2aQ6P4T0 1914 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Sult2a7A0A1B0GRF0 313 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cd300ld2A2A7W0 305 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cped1B2RX70 1026 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Capns1O88456 269 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cyp1a1P00184 524 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Klk1b16P04071 261 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cst3P21460 140 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Bmpr1aP36895 532 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Pwwp2aQ69Z61 730 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Syt14Q7TN84 555 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Olfr1197Q7TR13 314 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Olfr1196Q7TR14 314 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 MaobQ8BW75 520 aa13.04□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms