RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Yipf5Q9EQQ2 257 aa13.65□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Tgm7A2ART8 616 aa13.65□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Bop1P97452 732 aaKnown RBP13.65□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Styk1Q6J9G1 429 aa13.65□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Nedd4lQ8CFI0 1004 aa13.65□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Olfr164Q8VF87 315 aa13.65□□□□□ -0.22
Col5a1-201ENSMUST00000028280 H2afb1S4R1E0 115 aa13.65□□□□□ -0.22
Col5a1-201ENSMUST00000028280 H2afb3S4R1G7 115 aa13.65□□□□□ -0.22
Col5a1-201ENSMUST00000028280 Rhox6O70238 227 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 GnrhrQ01776 327 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Rhbdf1Q6PIX5 856 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr1046Q7TR79 316 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gpr61Q8C010 449 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Aoc1Q8JZQ5 751 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Prps2Q9CS42 318 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 QpctQ9CYK2 362 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Dusp26Q9D700 211 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gm45208A0A140LJ36 292 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Fignl1Q8BPY9 683 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Lats1Q8BYR2 1129 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Casc3Q8K3W3 698 aaKnown RBP13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Sh2b2Q9JID9 621 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Mknk1O08605 427 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Fastkd5Q7TMV3 762 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Fem1cQ8CEF1 617 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Ndc1Q8VCB1 673 aaKnown RBP13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr1280Q8VGG8 305 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Nrif1Q923B3 828 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Cby1Q9D1C2 127 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gpihbp1Q9D1N2 228 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Ttc39aA2ACP1 578 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Xpnpep3B7ZMP1 506 aaKnown RBP13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gm498D3YYH9 372 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Hoxc8P09025 242 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Ap2a1P17426 977 aaKnown RBP13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Slc22a23Q3UHH2 689 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Akt2Q60823 481 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Emc1Q8C7X2 997 aaKnown RBP13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 PdgfcQ8CI19 345 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Kctd15Q8K0E1 283 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Arv1Q9D0U9 266 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Cmpk1Q9DBP5 196 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Tlr6Q9EPW9 795 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Cntnap4Q99P47 1310 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 CcnjQ3TZI6 379 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Fam71f1Q3UZD7 341 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 March4Q80TE3 409 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Slc35f5Q8R314 524 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Cmtm3Q99LJ5 184 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Nop16Q9CPT5 178 aaKnown RBP13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Cngb3Q9JJZ9 694 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 4931408C20RikE9PWP9 1381 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Zfp14P10755 501 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Cd247P24161 164 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Trappc6aQ78XR0 159 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 DpcdQ8BPA8 203 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Rcbtb2Q99LJ7 551 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Actl6bQ99MR0 426 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 NmbrO54799 390 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gstm3P19639 218 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Pax7P47239 503 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Rab2bP59279 216 aaKnown RBP13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Fv1P70213 459 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Cpa6Q5U901 438 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Clec4a3Q8JZX6 237 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Sash3Q8K352 380 aa13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Csde1Q91W50 798 aaKnown RBP13.64□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Zfr2E9Q5M4 874 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 FxnO35943 207 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Pias1O88907 651 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 UtyP79457 1212 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Acsm3Q3UNX5 580 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Unc5aQ8K1S4 898 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Arl6ip5Q8R5J9 188 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Marc1Q9CW42 340 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Vmn2r22E9Q7S8 853 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr603L7N1Y4 312 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 MafP54843 370 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Tas2r7P59530 312 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Rpl26P61255 145 aaKnown RBP13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Cyp2d40Q6P8N9 338 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr26Q7TRB7 308 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr859Q7TRF5 309 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 RhdQ8CF94 418 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Adnp2Q8CHC8 1165 aaKnown RBP13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Fam3bQ9D309 235 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Ccdc54Q9DAL3 329 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr933Q9EQA0 308 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gsg1lD3Z7H4 322 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Hoxb6P09023 224 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Pcdh8Q7TSK3 1070 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Stk35Q80ZW0 539 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Itgb3bpQ9CQ82 176 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Il1rl2Q9ERS7 574 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Unc13cQ8K0T7 2210 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Smok4aA0JLX3 433 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Slc4a11A2AJN7 862 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Hcn1O88704 910 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Pip5k1bP70181 539 aa13.63□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gas6Q61592 674 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms