RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Gtf2h4O70422 463 aaKnown RBP15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 P01664 111 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 CratP47934 626 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Jmjd8Q3TA59 316 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tbc1d24Q3UUG6 561 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Olfr1364Q5SZS9 314 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Thnsl2Q80W22 483 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Susd6Q8BGE4 302 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Dcaf12l1Q8CBW4 501 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Rnf219Q8K2Y0 722 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Lsm1Q8VC85 133 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Arrb2Q91YI4 410 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Fam96aQ9DCL2 160 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cog8Q9JJA2 640 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Elovl3O35949 271 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Psma3O70435 255 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Matn4O89029 624 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 SbplQ3TUY3 232 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ccdc185Q3V118 621 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Znrf3Q5SSZ7 913 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Znf366Q6NS86 746 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Szrd1Q6NXN1 152 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ints6Q6PCM2 883 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 FukQ7TMC8 1090 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Zfyve1Q810J8 777 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ugt2b35Q8BJL9 529 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Eif3lQ8QZY1 564 aaKnown RBP15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Asb6Q91ZU1 418 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 EtfdhQ921G7 616 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Agpat5Q9D1E8 365 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Klhdc8bQ9D2D9 354 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Fabp12Q9DAK4 132 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Rpl7a-ps3A0A140T8L1 270 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Rpl9-ps6A0A140T8T4 192 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 A530032D15RikE9Q422 215 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Vmn2r3H3BJ88 915 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Clk1P22518 483 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Rpl9P51410 192 aaKnown RBP15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Lrrc3P59034 257 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Col6a2Q02788 1034 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Mmp11Q02853 492 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 InhbbQ04999 411 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Map4k2Q61161 821 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tmem214Q8BM55 687 aaKnown RBP15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gykl1Q8C635 549 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Dmtf1Q8CE22 761 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Slco3a1Q8R3L5 710 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cbr4Q91VT4 236 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Mapk8Q91Y86 384 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Cyp2j9Q924D1 502 aa15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Mkrn2Q9ERV1 416 aaKnown RBP15.76■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm7682A0A0J9YUM1 481 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm4969D3YZT1 566 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ddx43D3Z6P9 646 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Apol11bE9PUZ0 337 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Glyatl3E9Q5L8 290 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Sp1O89090 784 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 P06324 132 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 TshrP47750 764 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Pfdn6Q03958 127 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Kcnk9Q3LS21 402 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm5460Q3UQ97 254 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 MyorgQ69ZQ1 716 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Il20raQ6PHB0 546 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Micu2Q8CD10 432 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Wdr47Q8CGF6 920 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Bclaf1Q8K019 919 aaKnown RBP15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Olfr659Q8VGV6 322 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Il21Q9ES17 146 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Hacl1Q9QXE0 581 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Chrna6Q9R0W9 494 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm28576A0A087WRP6 222 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Fam166bA2AIP0 273 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Rhox2hK7N6P1 191 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ptch2O35595 1182 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gpr50O88495 591 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 SrgnP13609 152 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Hsd17b4P51660 735 aaKnown RBP15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Aqp8P56404 261 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Neurog1P70660 244 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 StradaQ3UUJ4 431 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 C2cd4cC2CD4Q5HZI2 419 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Arhgap19Q8BRH3 494 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Ttc24Q8BYG0 334 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Olfr690Q8VH18 315 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Zfp773Q9CZ29 471 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gtf2e2Q9D902 292 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Yae1d1Q9DAY6 216 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tmeff2Q9QYM9 374 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Catsperg2C6KI89 1145 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Clk4O35493 481 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Scg5P12961 212 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 JundP15066 341 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Klrb1cP27814 223 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Copz1P61924 177 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Rps3aP97351 264 aaKnown RBP15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Smad5P97454 465 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Tmem270Q6UJB9 264 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Otub1Q7TQI3 271 aa15.75■□□□□ 0.11
Trim28-201ENSMUST00000005705 Slc38a4Q8R1S9 547 aa15.75■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms