RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 PDGFRAP16234 1089 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 CEBPBP17676 345 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 CYP2A7P20853 494 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 LHCGRP22888 699 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 MT3P25713 68 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 MAGEA11P43364 429 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 CDX1P47902 265 aaPredicted RBP1.41□□□□□ -2.18
SNORA28-201ENST00000606769 KCNJ1P48048 391 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 ALDH3A2P51648 485 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 KRTAP10-6P60371 365 aaPredicted RBP1.41□□□□□ -2.18
SNORA28-201ENST00000606769 IRX6P78412 446 aaPredicted RBP1.41□□□□□ -2.18
SNORA28-201ENST00000606769 CDR2Q01850 454 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 SRSF9Q13242 221 aaKnown RBP eCLIP1.41□□□□□ -2.18
SNORA28-201ENST00000606769 KRT81Q14533 505 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 MTF1Q14872 753 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 NONOQ15233 471 aaKnown RBP eCLIP1.41□□□□□ -2.18
SNORA28-201ENST00000606769 UGCGQ16739 394 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 FAM174BQ3ZCQ3 159 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 GTDC1Q4AE62 458 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 PDLIM3Q53GG5 364 aaPredicted RBP1.41□□□□□ -2.18
SNORA28-201ENST00000606769 FAM133BQ5BKY9 247 aaKnown RBP1.41□□□□□ -2.18
SNORA28-201ENST00000606769 SLC35D3Q5M8T2 416 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 C20orf194Q5TEA3 1177 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 FAM72AQ5TYM5 149 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 GFI1BQ5VTD9 330 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 LYSMD4Q5XG99 296 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 FAM91A1Q658Y4 838 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 KRT39Q6A163 491 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 TXNRD3NBQ6F5E7 133 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 FAM72DQ6L9T8 149 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 PWWP2BQ6NUJ5 590 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 Q6ZSR9 355 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 GALNTL5Q7Z4T8 443 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 NRARPQ7Z6K4 114 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 FAM72BQ86X60 149 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 CATSPERDQ86XM0 798 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 TICAM2Q86XR7 235 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 LACC1Q8IV20 430 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 THNSL1Q8IYQ7 743 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 MARVELD2Q8N4S9 558 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 AMER3Q8N944 861 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 DBF4BQ8NFT6 615 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 OR5AP2Q8NGF4 316 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 C9orf43Q8TAL5 461 aaPredicted RBP1.41□□□□□ -2.18
SNORA28-201ENST00000606769 GATAD1Q8WUU5 269 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 HEXDCQ8WVB3 486 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 KCNE4Q8WWG9 221 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 PIK3R3Q92569 461 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 NR4A3Q92570 626 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 CENPTQ96BT3 561 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 ZNF653Q96CK0 615 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 RBM41Q96IZ5 413 aaKnown RBP1.41□□□□□ -2.18
SNORA28-201ENST00000606769 GDAP1L1Q96MZ0 367 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 URM1Q9BTM9 101 aaKnown RBP1.41□□□□□ -2.18
SNORA28-201ENST00000606769 GFRA4Q9GZZ7 299 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 ZMYND12Q9H0C1 365 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 FN3KQ9H479 309 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 ACTL8Q9H568 366 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 EGLN3Q9H6Z9 239 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 GSN-AS1Q9NRJ2 163 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 PLCXD1Q9NUJ7 323 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 MRGBPQ9NV56 204 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 RASAL2Q9UJF2 1139 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 TNNQ9UQP3 1299 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 HBS1LQ9Y450 684 aaKnown RBP1.41□□□□□ -2.18
SNORA28-201ENST00000606769 R4GN57 208 aa1.41□□□□□ -2.18
SNORA28-201ENST00000606769 NEDD4P46934 1319 aa1.4□□□□□ -2.18
SNORA28-201ENST00000606769 KIF26BQ2KJY2 2108 aa1.4□□□□□ -2.18
SNORA28-201ENST00000606769 TRAV34A0A0B4J273 112 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 A0A1W2PRQ8 180 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 HTR3EA5X5Y0 456 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 SHISA7A6NL88 538 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 G3V2L1 256 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 H3BMM5 538 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 PSMD14O00487 310 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 NTN3O00634 580 aaPredicted RBP1.4□□□□□ -2.19
SNORA28-201ENST00000606769 SLC30A4O14863 429 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 IPO8O15397 1037 aaKnown RBP1.4□□□□□ -2.19
SNORA28-201ENST00000606769 LINC01565O15544 149 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 ST8SIA3O43173 380 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 TLX2O43763 284 aaPredicted RBP1.4□□□□□ -2.19
SNORA28-201ENST00000606769 SNX3O60493 162 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 CDK2AP2O75956 126 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 DUS4LO95620 317 aaKnown RBP1.4□□□□□ -2.19
SNORA28-201ENST00000606769 EDN1P05305 212 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 ZSCAN5DPP0CG00 497 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 SCG2P13521 617 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 PSMA3P25788 255 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 CSTF2P33240 577 aaKnown RBP eCLIP1.4□□□□□ -2.19
SNORA28-201ENST00000606769 OPRL1P41146 370 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 ATP12AP54707 1039 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 RBP5P82980 135 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 C17orf67Q0P5P2 114 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 TRAP1Q12931 704 aaKnown RBP1.4□□□□□ -2.19
SNORA28-201ENST00000606769 RRS1Q15050 365 aaKnown RBP1.4□□□□□ -2.19
SNORA28-201ENST00000606769 FCN2Q15485 313 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 ZNF74Q16587 644 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 ALDH1L2Q3SY69 923 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 HECTD3Q5T447 861 aa1.4□□□□□ -2.19
SNORA28-201ENST00000606769 ARHGEF16Q5VV41 709 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms