RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 C12orf65Q9H3J6 166 aaKnown RBP18.15■□□□□ 0.5
CCDC9-205ENST00000600117 CCDC177Q9NQR7 707 aaPredicted RBP18.15■□□□□ 0.5
CCDC9-205ENST00000600117 INTS7Q9NVH2 962 aaKnown RBP18.15■□□□□ 0.5
CCDC9-205ENST00000600117 WWOXQ9NZC7 414 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 GRID1Q9ULK0 1009 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 PCDHB11Q9Y5F2 797 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 ACTL7BQ9Y614 415 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 IGHV5-51A0A0C4DH38 117 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 A0A0J9YY10 115 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 PYCARD-AS1I3L0S3 204 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 TOX3O15405 576 aaPredicted RBP18.14■□□□□ 0.49
CCDC9-205ENST00000600117 PLIN3O60664 434 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 CSO75390 466 aaKnown RBP18.14■□□□□ 0.49
CCDC9-205ENST00000600117 SPAG7O75391 227 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 S100BP04271 92 aaPredicted RBP18.14■□□□□ 0.49
CCDC9-205ENST00000600117 PVRP15151 417 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 RPA3P35244 121 aaPredicted RBP18.14■□□□□ 0.49
CCDC9-205ENST00000600117 TRA2AQ13595 282 aaKnown RBP eCLIP18.14■□□□□ 0.49
CCDC9-205ENST00000600117 TSTA3Q13630 321 aaPredicted RBP18.14■□□□□ 0.49
CCDC9-205ENST00000600117 SETDB1Q15047 1291 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 CACHD1Q5VU97 1274 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 PRAMEF13Q5VWM6 474 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 CARFQ8N187 725 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 FBXO39Q8N4B4 442 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 OR2L3Q8NG85 312 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 UBTD2Q8WUN7 234 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 SNRNP27Q8WVK2 155 aaKnown RBP18.14■□□□□ 0.49
CCDC9-205ENST00000600117 KLHL6Q8WZ60 621 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 ARL8AQ96BM9 186 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 MED8Q96G25 268 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 DEPDC7Q96QD5 511 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 OR4K3Q96R72 315 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 MIPEPQ99797 713 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 SH3GL2Q99962 352 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 ACAT2Q9BWD1 397 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 C1GALT1Q9NS00 363 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 TAC3Q9UHF0 121 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 ASB1Q9Y576 335 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 LRRK2Q5S007 2527 aa18.14■□□□□ 0.49
CCDC9-205ENST00000600117 GOLGA6L10A6NI86 522 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 A8MU76 341 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 IPO13O94829 963 aaKnown RBP18.13■□□□□ 0.49
CCDC9-205ENST00000600117 FKBP9O95302 570 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 GFAPP14136 432 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 ST6GAL1P15907 406 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 CDH3P22223 829 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 CCND1P24385 295 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 GDF5P43026 501 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 HSPA7P48741 367 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 AGTR2P50052 363 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 ALDH18A1P54886 795 aaKnown RBP18.13■□□□□ 0.49
CCDC9-205ENST00000600117 C16orf72Q14CZ0 275 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 SF1Q15637 639 aaKnown RBP18.13■□□□□ 0.49
CCDC9-205ENST00000600117 PFKFB4Q16877 469 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 PHF19Q5T6S3 580 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 AGBL2Q5U5Z8 902 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 KIAA1614Q5VZ46 1190 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 ICE2Q659A1 982 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 CAPN13Q6MZZ7 669 aaPredicted RBP18.13■□□□□ 0.49
CCDC9-205ENST00000600117 LCTLQ6UWM7 567 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 LSMEM2Q8N112 164 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 RCBTB1Q8NDN9 531 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 ESAMQ96AP7 390 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 TRAPPC9Q96Q05 1148 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 ZNF768Q9H5H4 540 aaKnown RBP18.13■□□□□ 0.49
CCDC9-205ENST00000600117 SSU72Q9NP77 194 aaKnown RBP18.13■□□□□ 0.49
CCDC9-205ENST00000600117 SLC6A20Q9NP91 592 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 TMCO1Q9UM00 188 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 SH2B3Q9UQQ2 575 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 PLLPQ9Y342 182 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 BSNQ9UPA5 3926 aa18.13■□□□□ 0.49
CCDC9-205ENST00000600117 AHCTF1Q8WYP5 2266 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 SLC9B1P1A6NJY1 282 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 A8MT66 165 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 G3V2L1 256 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 SLC28A2O43868 658 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 DLX3O60479 287 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 STK16O75716 305 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 RASSF9O75901 435 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 DXOO77932 396 aaKnown RBP18.12■□□□□ 0.49
CCDC9-205ENST00000600117 NPPBP16860 134 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 PRDX1Q06830 199 aaKnown RBP18.12■□□□□ 0.49
CCDC9-205ENST00000600117 VAC14Q08AM6 782 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 ZIC1Q15915 447 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 CCDC153Q494R4 210 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 THOC6Q86W42 341 aaKnown RBP18.12■□□□□ 0.49
CCDC9-205ENST00000600117 PTGR2Q8N8N7 351 aaPredicted RBP18.12■□□□□ 0.49
CCDC9-205ENST00000600117 LIN37Q96GY3 246 aaPredicted RBP18.12■□□□□ 0.49
CCDC9-205ENST00000600117 SLC41A2Q96JW4 573 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 CD244Q9BZW8 370 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 KLHL25Q9H0H3 589 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 PCBD2Q9H0N5 130 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 STMN4Q9H169 189 aaPredicted RBP18.12■□□□□ 0.49
CCDC9-205ENST00000600117 ABCF3Q9NUQ8 709 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 SLC17A7Q9P2U7 560 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 SLC22A14Q9Y267 594 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 KLHL20Q9Y2M5 609 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 KLK4Q9Y5K2 254 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 DOPEY2Q9Y3R5 2298 aa18.12■□□□□ 0.49
CCDC9-205ENST00000600117 KIF26BQ2KJY2 2108 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms