RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 EPN2O95208 641 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 PRAMEF12O95522 483 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 LCKP06239 509 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 AMD1P17707 334 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 PTX3P26022 381 aaPredicted RBP12.85□□□□□ -0.35
VRK3-209ENST00000594948 CORO1AP31146 461 aaKnown RBP12.85□□□□□ -0.35
VRK3-209ENST00000594948 CTSKP43235 329 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ARPP19P56211 112 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 IL1RL1Q01638 556 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 CAMK2GQ13555 558 aaPredicted RBP12.85□□□□□ -0.35
VRK3-209ENST00000594948 SMN1Q16637 294 aaKnown RBP12.85□□□□□ -0.35
VRK3-209ENST00000594948 IQCCQ4KMZ1 466 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 HECTD3Q5T447 861 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ZCCHC8Q6NZY4 707 aaKnown RBP12.85□□□□□ -0.35
VRK3-209ENST00000594948 C17orf99Q6UX52 265 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 AHSA2Q719I0 299 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 PTOV1Q86YD1 416 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 SNX29P2Q8IUI4 249 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 CCDC71Q8IV32 467 aaPredicted RBP12.85□□□□□ -0.35
VRK3-209ENST00000594948 ENTHD1Q8IYW4 607 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ATG16L2Q8NAA4 619 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 KBTBD8Q8NFY9 601 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 PSMA8Q8TAA3 256 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 PYCR2Q96C36 320 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 HSH2DQ96JZ2 352 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 TSSK3Q96PN8 268 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 YME1L1Q96TA2 773 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 SLX1AQ9BQ83 275 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 COPS4Q9BT78 406 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ELOVL6Q9H5J4 265 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ZFYVE1Q9HBF4 777 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 SACM1LQ9NTJ5 587 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ZNF232Q9UNY5 417 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 RNF6Q9Y252 685 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ATP11BQ9Y2G3 1177 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 TESMINQ9Y4I5 508 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ALPK3Q96L96 1907 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 GLYATL1P3A0A0U1RQE8 302 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 hCG_2039718K7EN88 272 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 FPGTO14772 594 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 PCDHGA12O60330 932 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 SNX4O95219 450 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 LATS1O95835 1130 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 TRBC1P01850 177 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 KLKB1P03952 638 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 C8GP07360 202 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ENGP17813 658 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ATF6P18850 670 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 PPIBP23284 216 aaKnown RBP12.85□□□□□ -0.35
VRK3-209ENST00000594948 CA5AP35218 305 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 GGT2P36268 569 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 SLC6A12P48065 614 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 CSNK1DP48730 415 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 HNMTP50135 292 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 CREMQ03060 361 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ELAVL2Q12926 359 aaKnown RBP12.85□□□□□ -0.35
VRK3-209ENST00000594948 SLC14A1Q13336 389 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ARHGEF7Q14155 803 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 CPSF6Q16630 551 aaKnown RBP eCLIP12.85□□□□□ -0.35
VRK3-209ENST00000594948 OR4F3Q6IEY1 312 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 SLC46A3Q7Z3Q1 461 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 AKAP14Q86UN6 197 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 ANKRD46Q86W74 232 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 P3H2Q8IVL5 708 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 NXPE1Q8N323 547 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 SYNPOQ8N3V7 929 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 C2orf69Q8N8R5 385 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 OR8J2Q8NGG1 315 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 RPL3LQ92901 407 aaKnown RBP12.85□□□□□ -0.35
VRK3-209ENST00000594948 CCDC97Q96F63 343 aaPredicted RBP12.85□□□□□ -0.35
VRK3-209ENST00000594948 METTL2AQ96IZ6 378 aaKnown RBP12.85□□□□□ -0.35
VRK3-209ENST00000594948 B3GALT6Q96L58 329 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 EHD1Q9H4M9 534 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 IL26Q9NPH9 171 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 CRLS1Q9UJA2 301 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 STOML2Q9UJZ1 356 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 MAPRE3Q9UPY8 281 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 CORO2BQ9UQ03 480 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 PADI2Q9Y2J8 665 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 PCDHGB3Q9Y5G1 929 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 PCDHGA6Q9Y5G7 932 aa12.85□□□□□ -0.35
VRK3-209ENST00000594948 A8MVJ9 347 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 M0R082 166 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 SCN2BO60939 215 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 RFPL2O75678 378 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 GJB5O95377 273 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 CDK1P06493 297 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 ASGR1P07306 291 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 ALPIP09923 528 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 TACR1P25103 407 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 SPAM1P38567 509 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 ETV6P41212 452 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 NSG1P42857 185 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 MAPK8P45983 427 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 RPIAP49247 311 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 PCYT1AP49585 367 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 TPTEP56180 551 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 WNT3P56703 355 aa12.84□□□□□ -0.35
VRK3-209ENST00000594948 CSTF3Q12996 717 aaKnown RBP12.84□□□□□ -0.35
VRK3-209ENST00000594948 DUSP4Q13115 394 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms