RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 TRIM48Q8IWZ4 208 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 ZNF740Q8NDX6 193 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 OR7G3Q8NG95 312 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 SLC37A2Q8TED4 501 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 PPP3R2Q96LZ3 170 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 EHD1Q9H4M9 534 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 SPHK1Q9NYA1 384 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 SDK1Q7Z5N4 2213 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 B4DGG1 531 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 C9JVG2 144 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 DNAJC8O75937 253 aaPredicted RBP17.05■□□□□ 0.32
HERC2-208ENST00000566635 GPX3P22352 226 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 DHPSP49366 369 aaPredicted RBP17.05■□□□□ 0.32
HERC2-208ENST00000566635 CORO7P57737 925 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 GPR18Q14330 331 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 AGKQ53H12 422 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 MED27Q6P2C8 311 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 FAM46DQ8NEK8 389 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 OR4E2Q8NGC2 313 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 LCN9Q8WX39 176 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 CMTM5Q96DZ9 223 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 EFCAB11Q9BUY7 163 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 PCBD2Q9H0N5 130 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 LRTM1Q9HBL6 345 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 SLC40A1Q9NP59 571 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 CCDC167Q9P0B6 97 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 CPNE7Q9UBL6 633 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 GPR45Q9Y5Y3 372 aa17.05■□□□□ 0.32
HERC2-208ENST00000566635 VILLO15195 856 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 SLC2A4P14672 509 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 PRDX6P30041 224 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 ADSLP30566 484 aaPredicted RBP17.04■□□□□ 0.32
HERC2-208ENST00000566635 AFF3P51826 1226 aaKnown RBP17.04■□□□□ 0.32
HERC2-208ENST00000566635 KCNJ2P63252 427 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 UBE2IP63279 158 aaKnown RBP17.04■□□□□ 0.32
HERC2-208ENST00000566635 PLCL1Q15111 1095 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 PMS2CLQ68D20 193 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 AMIGO1Q86WK6 493 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 OR2A1Q8NGT9 310 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 HUS1BQ8NHY5 278 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 LMX1AQ8TE12 382 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 ZDHHC1Q8WTX9 485 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 PCDHGA11Q9Y5H2 935 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 VPS13AQ96RL7 3174 aa17.04■□□□□ 0.32
HERC2-208ENST00000566635 SNRNP200O75643 2136 aaKnown RBP17.04■□□□□ 0.32
HERC2-208ENST00000566635 B2RBV5 119 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 KDM1AO60341 852 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 SDC3O75056 442 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 SH3BGRLO75368 114 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 VIPP01282 170 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 IDO1P14902 403 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 XRCC1P18887 633 aaPredicted RBP17.03■□□□□ 0.32
HERC2-208ENST00000566635 PTPN4P29074 926 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 SHMT2P34897 504 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 C21orf59P57076 290 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 EMX2Q04743 252 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 GSTA3Q16772 222 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 PAGE2BQ5JRK9 111 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 LYSMD4Q5XG99 296 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 FAM129CQ86XR2 697 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.03■□□□□ 0.32
HERC2-208ENST00000566635 MIER2Q8N344 545 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 GAB3Q8WWW8 586 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 SDR39U1Q9NRG7 319 aaPredicted RBP17.03■□□□□ 0.32
HERC2-208ENST00000566635 C1orf109Q9NX04 203 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 IGKV1-8A0A0C4DH67 115 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 A0A1B0GVT2 93 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 MAGEB17A8MXT2 336 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 H7BY64 318 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 BTN3A3O00478 584 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 PRICKLE3O43900 615 aaPredicted RBP17.03■□□□□ 0.32
HERC2-208ENST00000566635 HNRNPCL1O60812 293 aaKnown RBP17.03■□□□□ 0.32
HERC2-208ENST00000566635 SEC22BO75396 215 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 RSL1D1O76021 490 aaKnown RBP17.03■□□□□ 0.32
HERC2-208ENST00000566635 ETHE1O95571 254 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 CHRM5P08912 532 aaPredicted RBP17.03■□□□□ 0.32
HERC2-208ENST00000566635 CSTF3Q12996 717 aaKnown RBP17.03■□□□□ 0.32
HERC2-208ENST00000566635 HERC3Q15034 1050 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 IL23RQ5VWK5 629 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 ZFAND4Q86XD8 727 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 FUNDC1Q8IVP5 155 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 RBM15BQ8NDT2 890 aaKnown RBP17.03■□□□□ 0.32
HERC2-208ENST00000566635 ZNF548Q8NEK5 533 aaPredicted RBP17.03■□□□□ 0.32
HERC2-208ENST00000566635 APIPQ96GX9 242 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 TEX37Q96LM6 180 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 PRAP1Q96NZ9 151 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 BRINP2Q9C0B6 783 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 PELI2Q9HAT8 420 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 PRM3Q9NNZ6 103 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 POT1Q9NUX5 634 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 TAS2R1Q9NYW7 299 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 PCDHB11Q9Y5F2 797 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 WDFY4Q6ZS81 3184 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 TMEM131Q92545 1883 aa17.03■□□□□ 0.32
HERC2-208ENST00000566635 DMDP11532 3685 aa17.02■□□□□ 0.32
HERC2-208ENST00000566635 KIR2DS5A0A0G2JLQ3 304 aa17.02■□□□□ 0.32
HERC2-208ENST00000566635 A0A0G2JNG1 304 aa17.02■□□□□ 0.32
HERC2-208ENST00000566635 SERTM1A2A2V5 107 aa17.02■□□□□ 0.32
HERC2-208ENST00000566635 KIR2DS3K7RE56 304 aa17.02■□□□□ 0.32
HERC2-208ENST00000566635 NRP2O60462 931 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms