RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 NDUFS8O00217 210 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 PSMD9O00233 223 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 PDHXO00330 501 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 PTGESO14684 152 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 OGTO15294 1046 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 DCXO43602 365 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 KLK8O60259 260 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ATP9AO75110 1047 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 MOSPD3O75425 235 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ERN1O75460 977 aaKnown RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 PGLSO95336 258 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 YEATS4O95619 227 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 HIST1H2ABP04908 130 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 HOXB5P09067 269 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 HIST1H2ADP20671 130 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 LONP1P36776 959 aaKnown RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 MAGEA1P43355 309 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 MAPKAPK2P49137 400 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 MFAP3P55082 362 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ERVFRD-1P60508 538 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 CTAG1AP78358 180 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 EGR4Q05215 589 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 NECTIN1Q15223 517 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 GAGE13Q4V321 117 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 XKR3Q5GH77 459 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 NCR3LG1Q68D85 454 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 SFRP4Q6FHJ7 346 aaPredicted RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 FBXO42Q6P3S6 717 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 HIST3H2AQ7L7L0 130 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 TMEM173Q86WV6 379 aaPredicted RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 C4orf19Q8IY42 314 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 FBXL16Q8N461 479 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 RNF148Q8N7C7 305 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 AMER3Q8N944 861 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 CCDC63Q8NA47 563 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 SRFBP1Q8NEF9 429 aaKnown RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 OIT3Q8WWZ8 545 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ZCCHC14Q8WYQ9 949 aaKnown RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 GLG1Q92896 1179 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 NCLNQ969V3 563 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 EFHD2Q96C19 240 aaPredicted RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 MSI2Q96DH6 328 aaKnown RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 DAZAP1Q96EP5 407 aaKnown RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 LINGO1Q96FE5 620 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 RPGRIP1Q96KN7 1286 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 EGLN2Q96KS0 407 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 SPATA33Q96N06 139 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 GPR78Q96P69 363 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 CDT1Q9H211 546 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 PIGMQ9H3S5 423 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 HIPK3Q9H422 1215 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 RIOX1Q9H6W3 641 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 EXO5Q9H790 373 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 Q9N2J8 555 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 IL23AQ9NPF7 189 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ZCCHC3Q9NUD5 404 aaKnown RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 TRNAU1APQ9NX07 287 aaKnown RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ICKQ9UPZ9 632 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 CLIC4Q9Y696 253 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ROBO3Q96MS0 1386 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 A0A075B6Q4 140 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 UBE2QL1A1L167 161 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 HELTA6NFD8 242 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 KBTBD13C9JR72 458 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 E9PI62 339 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 H0YGN5 161 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ADAM12O43184 909 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 AP5Z1O43299 807 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 PRKAB2O43741 272 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 TBX19O60806 448 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 JRKO75564 520 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 C1QTNF9P0C862 333 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 PLA2G4BP0C869 781 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 CYP2C8P10632 490 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 VPREB1P12018 145 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 GCSHP23434 173 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 CALML3P27482 149 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 NUP62P37198 522 aaPredicted RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 CAPGP40121 348 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 STAT6P42226 847 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 HMGCS2P54868 508 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ABATP80404 500 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 HSPB3Q12988 150 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 FSCBQ5H9T9 825 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 TRMT10BQ6PF06 316 aaKnown RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 KCNV1Q6PIU1 500 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ZC3H14Q6PJT7 736 aaKnown RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 PRSS55Q6UWB4 352 aaPredicted RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 FAM198BQ6UWH4 519 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 GPR180Q86V85 440 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 FAM228AQ86W67 206 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 FUKQ8N0W3 1084 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 FAM109AQ8N4B1 249 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 ZCCHC9Q8N567 271 aaKnown RBP5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 MINDY2Q8NBR6 621 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 KIAA0895Q8NCT3 520 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 C17orf47Q8NEP4 570 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 NUDT10Q8NFP7 164 aa5.02□□□□□ -1.61
VPS35P1-201ENST00000563400 LENG9Q96B70 501 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms