RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ANKRD20A2Q5SQ80 823 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ANKRD20A1Q5TYW2 823 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ANKRD20A3Q5VUR7 823 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ALS2CLQ60I27 953 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 KIAA1161Q6NSJ0 714 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 C11orf63Q6NUN7 778 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 GUSBP11Q6P575 273 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 BRAT1Q6PJG6 821 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 C19orf48Q6RUI8 117 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 IL27RAQ6UWB1 636 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 KYAT3Q6YP21 454 aaKnown RBP4.18□□□□□ -1.74
SPG11-211ENST00000558561 CCNI2Q6ZMN8 369 aaPredicted RBP4.18□□□□□ -1.74
SPG11-211ENST00000558561 PEX26Q7Z412 305 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 KIAA1328Q86T90 577 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 IQCHQ86VS3 1027 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 HEATR4Q86WZ0 1026 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 MAP7D3Q8IWC1 876 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 SLC35F3Q8IY50 421 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ULK2Q8IYT8 1036 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 TTC30BQ8N4P2 665 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 PAF1Q8N7H5 531 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 Q8N9G6 341 aaPredicted RBP4.18□□□□□ -1.74
SPG11-211ENST00000558561 SLC16A11Q8NCK7 471 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ZNF548Q8NEK5 533 aaPredicted RBP4.18□□□□□ -1.74
SPG11-211ENST00000558561 HCAR2Q8TDS4 363 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 HTR3CQ8WXA8 447 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ASB12Q8WXK4 309 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ADAMTS14Q8WXS8 1223 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 RAB7BQ96AH8 199 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 DTD2Q96FN9 168 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 HES6Q96HZ4 224 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 PPP1R16AQ96I34 528 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 Q96MF0 132 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 MCCC1Q96RQ3 725 aaPredicted RBP4.18□□□□□ -1.74
SPG11-211ENST00000558561 TMEM121Q9BTD3 319 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 SPATA5L1Q9BVQ7 753 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 DPH1Q9BZG8 443 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 POLR1EQ9GZS1 481 aaKnown RBP4.18□□□□□ -1.74
SPG11-211ENST00000558561 SLC25A51Q9H1U9 297 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 SLC32A1Q9H598 525 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ERVMER34-1Q9H9K5 563 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 GRPEL1Q9HAV7 217 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 CASS4Q9NQ75 786 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 TBCCD1Q9NVR7 557 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 TRMT1Q9NXH9 659 aaKnown RBP4.18□□□□□ -1.74
SPG11-211ENST00000558561 AMFRQ9UKV5 643 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 DNPEPQ9ULA0 475 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 PYCARDQ9ULZ3 195 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 NEU2Q9Y3R4 380 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 PCDHGB2Q9Y5G2 931 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 PIKFYVEQ9Y2I7 2098 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 LAMA5O15230 3695 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 CCDC88CQ9P219 2028 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 IGF2RP11717 2491 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 DMXL2Q8TDJ6 3036 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 CELSR3Q9NYQ7 3312 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 A0A087WWL8 130 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 A0A1W2PQM1 296 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 TCRBV7S3A2A0A539 114 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 OR51F1A6NGY5 319 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 ISM1B1AKI9 464 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 MYO1CO00159 1063 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 KCNN4O15554 427 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 FLRT2O43155 660 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 AQP9O43315 295 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 PSTPIP1O43586 416 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 TLX3O43711 291 aaPredicted RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 TNFP01375 233 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 HGFP14210 728 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 ZNF8P17098 575 aaPredicted RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 CKMT2P17540 419 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 DESP17661 470 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 SERPINB6P35237 376 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 ADRA1AP35348 466 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 DPP6P42658 865 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 GDF5P43026 501 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 GRK6P43250 576 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 GPR1P46091 355 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 GNPDA1P46926 289 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 SPINT3P49223 89 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 THOP1P52888 689 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 MAZP56270 477 aaKnown RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 RWDD2BP57060 319 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 OR1D5P58170 312 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 POLR2LP62875 67 aaKnown RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 MRPS25P82663 173 aaKnown RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 CDK3Q00526 305 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 PPARDQ03181 441 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 CDK18Q07002 472 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 ELP6Q0PNE2 266 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 KIF5AQ12840 1032 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 SRSF6Q13247 344 aaKnown RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 TUBB3Q13509 450 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 HLXQ14774 488 aaPredicted RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 NFATC4Q14934 902 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 TRIP13Q15645 432 aaPredicted RBP4.17□□□□□ -1.74
SPG11-211ENST00000558561 CHRNA6Q15825 494 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 SLC45A4Q5BKX6 768 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 CFAP58Q5T655 872 aa4.17□□□□□ -1.74
SPG11-211ENST00000558561 CCDC181Q5TID7 509 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms