RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 IGHV1-45A0A0A0MS14 117 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 IGKV1-8A0A0C4DH67 115 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 A0A1B0GUH1 482 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 IDSB3KWA1 339 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 AP3B1O00203 1094 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 ZG16O60844 167 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 PHF2O75151 1096 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 NIPSNAP2O75323 286 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 VAPBO95292 243 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 SERPINA7P05543 415 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 ERVK-10P10266 1014 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 FDXRP22570 491 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 SLC26A3P40879 764 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 TNFSF10P50591 281 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 TDGF1P3P51864 188 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 EMP2P54851 167 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 ADARP55265 1226 aaKnown RBP15.17■□□□□ 0.02
SCFD1-224ENST00000557713 ARG2P78540 354 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 DSG2Q14126 1118 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 TYSND1Q2T9J0 566 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 ANKRD20A4Q4UJ75 823 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.17■□□□□ 0.02
SCFD1-224ENST00000557713 SP5Q6BEB4 398 aaPredicted RBP15.17■□□□□ 0.02
SCFD1-224ENST00000557713 DRICH1Q6PGQ1 229 aaPredicted RBP15.17■□□□□ 0.02
SCFD1-224ENST00000557713 CES3Q6UWW8 571 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 C4orf22Q6V702 233 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 SDCCAG8Q86SQ7 713 aaPredicted RBP15.17■□□□□ 0.02
SCFD1-224ENST00000557713 PAQR7Q86WK9 346 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 ARHGEF39Q8N4T4 335 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 BRIX1Q8TDN6 353 aaKnown RBP15.17■□□□□ 0.02
SCFD1-224ENST00000557713 SMPDL3AQ92484 453 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 RELTQ969Z4 430 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 MFSD3Q96ES6 412 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 MVB12AQ96EY5 273 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 CABS1Q96KC9 395 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 TCF12Q99081 682 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 TGIF2Q9GZN2 237 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 PTGFRNQ9P2B2 879 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 TRPC4Q9UBN4 977 aa15.17■□□□□ 0.02
SCFD1-224ENST00000557713 RUVBL1Q9Y265 456 aaKnown RBP15.17■□□□□ 0.02
SCFD1-224ENST00000557713 DYTNA2CJ06 578 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 ARHGEF33A8MVX0 844 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 H3BMM5 538 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 MYO1CO00159 1063 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 FFAR3O14843 346 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 PCDH17O14917 1159 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 GPR42O15529 346 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 PRPF4O43172 522 aaKnown RBP eCLIP15.16■□□□□ 0.02
SCFD1-224ENST00000557713 HNRNPRO43390 633 aaKnown RBP15.16■□□□□ 0.02
SCFD1-224ENST00000557713 PSIP1O75475 530 aaKnown RBP15.16■□□□□ 0.02
SCFD1-224ENST00000557713 BMP10O95393 424 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 ESR1P03372 595 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 CXCR2P25025 360 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 MGAT1P26572 445 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 TNFRSF8P28908 595 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 HKDC1Q2TB90 917 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 ACSBG2Q5FVE4 666 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 ZNF425Q6IV72 752 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 MRNIPQ6NTE8 343 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 SUSD1Q6UWL2 747 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 AMER3Q8N944 861 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 OR2A5Q96R48 311 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 MRPS30Q9NP92 439 aaKnown RBP15.16■□□□□ 0.02
SCFD1-224ENST00000557713 SYBUQ9NX95 663 aa15.16■□□□□ 0.02
SCFD1-224ENST00000557713 TSR3Q9UJK0 312 aaKnown RBP15.16■□□□□ 0.02
SCFD1-224ENST00000557713 LOC102723996A0A087X1L8 192 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 TRAV17A0A0B4J275 112 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 GOLGA8KD6RF30 607 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 GOLGA8TH3BQL2 631 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 FOXS1O43638 330 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 VPS26AO75436 327 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 PRF1P14222 555 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 CHRM3P20309 590 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 RPA3P35244 121 aaPredicted RBP15.15■□□□□ 0.02
SCFD1-224ENST00000557713 BASP1P80723 227 aaKnown RBP15.15■□□□□ 0.02
SCFD1-224ENST00000557713 RELAQ04206 551 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 EEF1A2Q05639 463 aaKnown RBP15.15■□□□□ 0.02
SCFD1-224ENST00000557713 PRDX1Q06830 199 aaKnown RBP15.15■□□□□ 0.02
SCFD1-224ENST00000557713 ARHGAP19Q14CB8 494 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 INAQ16352 499 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 KLHL38Q2WGJ6 581 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 RNF187Q5TA31 235 aaPredicted RBP15.15■□□□□ 0.02
SCFD1-224ENST00000557713 MEI1Q5TIA1 1274 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 GARNL3Q5VVW2 1013 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 LRRC8BQ6P9F7 803 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 TMEM205Q6UW68 189 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 FJX1Q86VR8 437 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 SRRM1Q8IYB3 904 aaKnown RBP15.15■□□□□ 0.02
SCFD1-224ENST00000557713 OTUD6BQ8N6M0 293 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 SIRT6Q8N6T7 355 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 CSNK1A1LQ8N752 337 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 NR4A3Q92570 626 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 MARVELD3Q96A59 401 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 FAM136AQ96C01 138 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 MMABQ96EY8 250 aaPredicted RBP15.15■□□□□ 0.02
SCFD1-224ENST00000557713 PKP4Q99569 1192 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 YIPF2Q9BWQ6 316 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 MKKSQ9NPJ1 570 aaPredicted RBP15.15■□□□□ 0.02
SCFD1-224ENST00000557713 C14orf105Q9NVL8 296 aa15.15■□□□□ 0.02
SCFD1-224ENST00000557713 GUCA1BQ9UMX6 200 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms