RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SLC6A2P23975 617 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 ACADLP28330 430 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 HTR1EP28566 365 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 SLC7A1P30825 629 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 DRD3P35462 400 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 RPL3P39023 403 aaKnown RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 HALP42357 657 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 DPP6P42658 865 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 ASMTP46597 345 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 ZFP36L2P47974 494 aaKnown RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 HTR6P50406 440 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 GALK1P51570 392 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 SLC7A2P52569 658 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 UFM1P61960 85 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 RPS14P62263 151 aaKnown RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 RPL38P63173 70 aaKnown RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 CDK3Q00526 305 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 CHIT1Q13231 466 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 SGCGQ13326 291 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 KIAA0040Q15053 153 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 CPSF6Q16630 551 aaKnown RBP eCLIP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 HIST2H2ACQ16777 129 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 C18orf21Q32NC0 220 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 POM121L1PQ3SYA9 428 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 RFTN2Q52LD8 501 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 USP39Q53GS9 565 aaKnown RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 SPIN4Q56A73 249 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 FBXO48Q5FWF7 155 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 ATG9BQ674R7 924 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 HIST2H2AA3Q6FI13 130 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 LCN8Q6JVE9 175 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 TLDC1Q6P9B6 456 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 PDZD3Q86UT5 571 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 APLFQ8IW19 511 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 DCUN1D3Q8IWE4 304 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 SLC15A3Q8IY34 581 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 CFAP206Q8IYR0 622 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 HDDC3Q8N4P3 179 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 DENND6BQ8NEG7 585 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 BHLHE22Q8NFJ8 381 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 OR52E4Q8NGH9 312 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 SLC13A3Q8WWT9 602 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 CXorf40BQ96DE9 158 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 CHFRQ96EP1 664 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 UHRF1Q96T88 793 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 PKP4Q99569 1192 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 KXD1Q9BQD3 176 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 TIMM29Q9BSF4 260 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 SGPP1Q9BX95 441 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 RAB11FIP5Q9BXF6 653 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 DPY30Q9C005 99 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 Q9H521 79 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 CLMPQ9H6B4 373 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 WDR26Q9H7D7 661 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 ARMC1Q9NVT9 282 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 SPATA6Q9NWH7 488 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 VPS29Q9UBQ0 182 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 MBD1Q9UIS9 605 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 MAGEL2Q9UJ55 1249 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 MCM8Q9UJA3 840 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 RUVBL1Q9Y265 456 aaKnown RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 SLC22A14Q9Y267 594 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 NCKAP1Q9Y2A7 1128 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 WBP11Q9Y2W2 641 aaKnown RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 PCDHA9Q9Y5H5 950 aa7.08□□□□□ -1.28
ATXN3-221ENST00000553498 MYO18AQ92614 2054 aaKnown RBP7.08□□□□□ -1.28
ATXN3-221ENST00000553498 PRSS51A0A1B0GVH4 220 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 FFAR3O14843 346 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 MID1O15344 667 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 GPR42O15529 346 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 HNRNPRO43390 633 aaKnown RBP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 GMNNO75496 209 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 PCDH8O95206 1070 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 SLC16A8O95907 504 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 PDYNP01213 254 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 IGHA1P01876 353 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 ERGP11308 486 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 MYCLP1P12525 358 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 BCKDHAP12694 445 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 ZNF8P17098 575 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 IL10P22301 178 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 CXCR2P25025 360 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 PSMA4P25789 261 aaKnown RBP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 IMPA1P29218 277 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 PIK3CBP42338 1070 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 GSTM5P46439 218 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 SESN3P58005 492 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 TAS2R38P59533 333 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 GPLD1P80108 840 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 MRPS35P82673 323 aaKnown RBP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 GRSF1Q12849 480 aaKnown RBP eCLIP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 NAE1Q13564 534 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 MAPKAPK3Q16644 382 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 WSCD2Q2TBF2 565 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 XKR6Q5GH73 641 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 TMEM196Q5HYL7 178 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 OGFRL1Q5TC84 451 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-221ENST00000553498 METRNLQ641Q3 311 aa7.07□□□□□ -1.28
ATXN3-221ENST00000553498 IRGCQ6NXR0 463 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms