RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TDP1Q9NUW8 608 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 SPATA6Q9NWH7 488 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-205ENST00000553474 ERVW-1Q9UQF0 538 aa12.53□□□□□ -0.4
SHMT2-205ENST00000553474 NEDD8-MDP1E9PL57 170 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 PSMD11O00231 422 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 BNIP3LO60238 219 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 DPM1O60762 260 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 E2F6O75461 281 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 EPN2O95208 641 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 CXCL14O95715 111 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 SERPINA1P01009 418 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 CATP04040 527 aaKnown RBP12.52□□□□□ -0.41
SHMT2-205ENST00000553474 POLR2EP19388 210 aaKnown RBP12.52□□□□□ -0.41
SHMT2-205ENST00000553474 GSTM2P28161 218 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 DCTP40126 519 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 HALP42357 657 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 UBE3AQ05086 875 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 VEZF1Q14119 521 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 E2F2Q14209 437 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 PLCL1Q15111 1095 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 ZNF697Q5TEC3 545 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 GRHL2Q6ISB3 625 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 SHQ1Q6PI26 577 aaKnown RBP12.52□□□□□ -0.41
SHMT2-205ENST00000553474 DNAJC14Q6Y2X3 702 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-205ENST00000553474 CAMKMTQ7Z624 323 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 ADIPOR2Q86V24 386 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 NRSN1Q8IZ57 195 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 FAM86B1Q8N7N1 296 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 FBXO15Q8NCQ5 510 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-205ENST00000553474 SETD9Q8NE22 299 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 VPS37AQ8NEZ2 397 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 WDR20Q8TBZ3 569 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 NETO1Q8TDF5 533 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 ZNF566Q969W8 418 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 TMEM159Q96B96 161 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 TSSK3Q96PN8 268 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 TBCDQ9BTW9 1192 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 CARS2Q9HA77 564 aaKnown RBP12.52□□□□□ -0.41
SHMT2-205ENST00000553474 THG1LQ9NWX6 298 aaKnown RBP12.52□□□□□ -0.41
SHMT2-205ENST00000553474 GPRC5BQ9NZH0 403 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 SLCO3A1Q9UIG8 710 aa12.52□□□□□ -0.41
SHMT2-205ENST00000553474 HIDE1A8MVS5 230 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 SLC9A3R1O14745 358 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-205ENST00000553474 SGTAO43765 313 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 ATG13O75143 517 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 SEC14L2O76054 403 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 CCDC159P0C7I6 412 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 ITGAMP11215 1152 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 BMP1P13497 986 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 TYRP14679 529 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 PTPN2P17706 415 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 EEF1B2P24534 225 aaKnown RBP12.51□□□□□ -0.41
SHMT2-205ENST00000553474 HOXA9P31269 272 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 RXRGP48443 463 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 PRLHRP49683 370 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 RAB15P59190 212 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 VAC14Q08AM6 782 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 NKG7Q16617 165 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 PGS1Q32NB8 556 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 C6orf141Q5SZD1 244 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 CPZQ66K79 652 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 SPESP1Q6UW49 350 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 DPPA4Q7L190 304 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 DET1Q7L5Y6 550 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 SYT12Q8IV01 421 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 VRK3Q8IV63 474 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 CPA6Q8N4T0 437 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 ARL10Q8N8L6 244 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 CLHC1Q8NHS4 586 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 RAB2BQ8WUD1 216 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 NUDT8Q8WV74 236 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 BTN2A2Q8WVV5 523 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 CXorf40BQ96DE9 158 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 C11orf24Q96F05 449 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-205ENST00000553474 APIPQ96GX9 242 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 APOLD1Q96LR9 279 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 FOPNLQ96NB1 174 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 TTYH1Q9H313 450 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-205ENST00000553474 IL1RAPQ9NPH3 570 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 AASDHPPTQ9NRN7 309 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 PPT2Q9UMR5 302 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 LOC100130705A0A1B0GUX0 176 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 H3BMQ9 156 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 UGT2B11O75310 529 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 ABCB1P08183 1280 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-205ENST00000553474 SRPRAP08240 638 aaKnown RBP12.51□□□□□ -0.41
SHMT2-205ENST00000553474 TACR1P25103 407 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 RPL10P27635 214 aaKnown RBP12.51□□□□□ -0.41
SHMT2-205ENST00000553474 NEK2P51955 445 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 TPD52P55327 224 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-205ENST00000553474 ACSM2AQ08AH3 577 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 KCNAB2Q13303 367 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 CAMK1Q14012 370 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 VMACQ2NL98 169 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 GTDC1Q4AE62 458 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 SYTL3Q4VX76 610 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 SPIN4Q56A73 249 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 ZNF805Q5CZA5 627 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 ACSM2BQ68CK6 577 aa12.51□□□□□ -0.41
SHMT2-205ENST00000553474 ASTLQ6HA08 431 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms