RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 ELFN2Q5R3F8 820 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 SHQ1Q6PI26 577 aaKnown RBP4.53□□□□□ -1.68
LIMA1-205ENST00000550592 C11orf88Q6PI97 169 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 CORO6Q6QEF8 472 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 MOXD1Q6UVY6 613 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 C9orf139Q6ZV77 190 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 ZNF771Q7L3S4 317 aaPredicted RBP4.53□□□□□ -1.68
LIMA1-205ENST00000550592 ARHGAP22Q7Z5H3 698 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 ZNF554Q86TJ5 538 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 TIGD4Q8IY51 512 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 CFAP206Q8IYR0 622 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 BMPERQ8N8U9 685 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 DMBX1Q8NFW5 382 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 HSD17B8Q92506 261 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 ST6GAL2Q96JF0 529 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 CAPNS2Q96L46 248 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 ZNF583Q96ND8 569 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 TRAF4Q9BUZ4 470 aaPredicted RBP4.53□□□□□ -1.68
LIMA1-205ENST00000550592 FN3KQ9H479 309 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 ZNF556Q9HAH1 456 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 DNAJC4Q9NNZ3 241 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 ARGLU1Q9NWB6 273 aaPredicted RBP4.53□□□□□ -1.68
LIMA1-205ENST00000550592 RASAL2Q9UJF2 1139 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 SLC7A7Q9UM01 511 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 TRIM17Q9Y577 477 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 POMT1Q9Y6A1 747 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 SPATA31E1Q6ZUB1 1445 aa4.53□□□□□ -1.68
LIMA1-205ENST00000550592 EIF3AQ14152 1382 aaKnown RBP4.53□□□□□ -1.69
LIMA1-205ENST00000550592 LMO7Q8WWI1 1683 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 TRIOBPQ9H2D6 2365 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 A0A1W2PPK0 400 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 ENO4A6NNW6 628 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 F7P08709 466 aaPredicted RBP4.52□□□□□ -1.69
LIMA1-205ENST00000550592 FAM58BPP0C7Q3 252 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 HAPLN1P10915 354 aaPredicted RBP4.52□□□□□ -1.69
LIMA1-205ENST00000550592 EPCAMP16422 314 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 CASTP20810 708 aaKnown RBP4.52□□□□□ -1.69
LIMA1-205ENST00000550592 MUTP22033 750 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 ACAT1P24752 427 aaKnown RBP4.52□□□□□ -1.69
LIMA1-205ENST00000550592 PDX1P52945 283 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 ERVFC1-1P60608 527 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 DLK1P80370 383 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 SCN1BQ07699 218 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 DMPKQ09013 629 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 VEZF1Q14119 521 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 UGCGQ16739 394 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 UGT3A2Q3SY77 523 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 MCMDC2Q4G0Z9 681 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 TCTE1Q5JU00 501 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 SFMBT2Q5VUG0 894 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 FAM91A1Q658Y4 838 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 MSANTD1Q6ZTZ1 278 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 ANO5Q75V66 913 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 SPATA21Q7Z572 469 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 TMEM139Q8IV31 216 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 ANKRD13CQ8N6S4 541 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 SLC24A4Q8NFF2 622 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 OLIG1Q8TAK6 271 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 GRHL3Q8TE85 626 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 KCNE4Q8WWG9 221 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 MR1Q95460 341 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 ATP6V1E2Q96A05 226 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 FAM122AQ96E09 287 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 SLC47A1Q96FL8 570 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 JAKMIP1Q96N16 626 aaKnown RBP4.52□□□□□ -1.69
LIMA1-205ENST00000550592 RAD9AQ99638 391 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 TRMT61BQ9BVS5 477 aaKnown RBP4.52□□□□□ -1.69
LIMA1-205ENST00000550592 GKN1Q9NS71 199 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 SPHK1Q9NYA1 384 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 DNAJB9Q9UBS3 223 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 JRKLQ9Y4A0 524 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 IFT172Q9UG01 1749 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 NUP155O75694 1391 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 SBF1O95248 1867 aa4.52□□□□□ -1.69
LIMA1-205ENST00000550592 PIK3C2AO00443 1686 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 ADAMTS7Q9UKP4 1686 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 PSMA7O14818 248 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 SLC7A4O43246 635 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 BUB3O43684 328 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 KRT36O76013 467 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 PIGNO95427 931 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 MMP10P09238 476 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 PAX1P15863 534 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 AMD1P17707 334 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 MARK3P27448 753 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 EPHA2P29317 976 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 CTNNA1P35221 906 aaKnown RBP4.51□□□□□ -1.69
LIMA1-205ENST00000550592 PRKCIP41743 596 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 TNNT3P45378 269 aaPredicted RBP4.51□□□□□ -1.69
LIMA1-205ENST00000550592 CRKLP46109 303 aaKnown RBP4.51□□□□□ -1.69
LIMA1-205ENST00000550592 ALDH3A2P51648 485 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 CLDN15P56746 228 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 TUBB4BP68371 445 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 LGALS3BPQ08380 585 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 NPTX1Q15818 432 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 TWISTNBQ3B726 338 aaPredicted RBP4.51□□□□□ -1.69
LIMA1-205ENST00000550592 ITPRIPL2Q3MIP1 535 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 FAM174BQ3ZCQ3 159 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 PHLDA2Q53GA4 152 aa4.51□□□□□ -1.69
LIMA1-205ENST00000550592 ZRANB3Q5FWF4 1079 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms