RNA–Protein interactions for RNA: ENST00000546125.1

KNTC1-215, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 624 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-215ENST00000546125 KMT2EQ8IZD2 1858 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 PLXNA1Q9UIW2 1896 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 A0A0G2JMZ2 1700 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 DDX60LQ5H9U9 1706 aaKnown RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 COL4A4P53420 1690 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 RPAP1Q9BWH6 1393 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 C1orf226A1L170 272 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 NPIPB15A6NHN6 443 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 GLOD5A6NK44 160 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 LIPT2A6NK58 231 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 YDJCA8MPS7 323 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 A8MV72 311 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 MYO1GB0I1T2 1018 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 H0YAE9 185 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 DNM1LO00429 736 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 PSMD14O00487 310 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 HS3ST1O14792 307 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 PGRMC2O15173 223 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 ZNHIT1O43257 154 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 KINO60870 393 aaKnown RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 LRP3O75074 770 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 ENTPD3O75355 529 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 PALMO75781 387 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 BBOX1O75936 387 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 NKX2-2O95096 273 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 CAVIN2O95810 425 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 HEXBP07686 556 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 SPARCP09486 303 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 MYBL1P10243 752 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 SFTPCP11686 197 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 ZNF182P17025 639 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 POLR2CP19387 275 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 GLIPR1P48060 266 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 GPC3P51654 580 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 HSD17B4P51659 736 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 VCPP55072 806 aaKnown RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 SH3BGRP55822 239 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 RPL7AP62424 266 aaKnown RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 PITX1P78337 314 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 COG7P83436 770 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 KLHL30Q0D2K2 578 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 COX10Q12887 443 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 CBX3Q13185 183 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 ZNF234Q14588 700 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 CRY2Q49AN0 593 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 ZNF805Q5CZA5 627 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 RAB41Q5JT25 222 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 TOR1AIP1Q5JTV8 583 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 C9orf152Q5JTZ5 239 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 SIRPB2Q5JXA9 342 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 C18orf63Q68DL7 685 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 ADALQ6DHV7 355 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 OR7E24Q6IFN5 339 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 IRGCQ6NXR0 463 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 FBXL22Q6P050 247 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 TMEM154Q6P9G4 183 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 DENND5BQ6ZUT9 1274 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 OTUD6AQ7L8S5 288 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 CACNA2D4Q7Z3S7 1137 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 GLRX5Q86SX6 157 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 DNAAF5Q86Y56 855 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 UBALD2Q8IYN6 164 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 WDTC1Q8N5D0 677 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 FRMD1Q8N878 549 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 DENND6BQ8NEG7 585 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 ACVR1CQ8NER5 493 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 OR52I2Q8NH67 350 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 OR5R1Q8NH85 324 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 CTCFLQ8NI51 663 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 SETD6Q8TBK2 473 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 POMGNT1Q8WZA1 660 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 IGSF8Q969P0 613 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 SYAP1Q96A49 352 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 LINGO1Q96FE5 620 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 VPS39Q96JC1 886 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 PPP1R13BQ96KQ4 1090 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 AK8Q96MA6 479 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 DACH2Q96NX9 599 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 NR1H4Q96RI1 486 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 PARK7Q99497 189 aaKnown RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 RTP3Q9BQQ7 232 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 NEURL2Q9BR09 285 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 SPXQ9BT56 116 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 TEX13AQ9BXU3 409 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 NYXQ9GZU5 481 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 NT5C3AQ9H0P0 336 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 MMADHCQ9H3L0 296 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 OPA3Q9H6K4 179 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 LIN28AQ9H9Z2 209 aaKnown RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 UPF2Q9HAU5 1272 aaKnown RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 MID1IP1Q9NPA3 183 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 MYOZ2Q9NPC6 264 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 COQ3Q9NZJ6 369 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 EHD2Q9NZN4 543 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 SUCLA2Q9P2R7 463 aaPredicted RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 EXTL2Q9UBQ6 330 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 LIMA1Q9UHB6 759 aaKnown RBP2.29□□□□□ -2.04
KNTC1-215ENST00000546125 FBXL5Q9UKA1 691 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 FBXL2Q9UKC9 423 aa2.29□□□□□ -2.04
KNTC1-215ENST00000546125 ACSL5Q9ULC5 683 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms