RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	SLCO2B1	O94956	709 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	KRT14	P02533	472 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	CHRM5	P08912	532 aa	Predicted RBP	7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	MLN	P12872	115 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	PLA2G2A	P14555	144 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	ST6GAL1	P15907	406 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	PAM	P19021	973 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	TCN2	P20062	427 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	AOAH	P28039	575 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	OAS2	P29728	719 aa	Known RBP	7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	PKLR	P30613	574 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	HOXC12	P31275	282 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	CCR7	P32248	378 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	COIL	P38432	576 aa	Predicted RBP	7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	MAGEA3	P43357	314 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	CCR10	P46092	362 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	VPS41	P49754	854 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	RAB28	P51157	221 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	ADAR	P55265	1226 aa	Known RBP	7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	POLE2	P56282	527 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	HSPA14	Q0VDF9	509 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	PRKG2	Q13237	762 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	DNASE1L3	Q13609	305 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	BRD3	Q15059	726 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	TRIP13	Q15645	432 aa	Predicted RBP	7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	GPR19	Q15760	415 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	ZNF789	Q5FWF6	425 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	MRNIP	Q6NTE8	343 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	CCDC137	Q6PK04	289 aa	Known RBP	7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	ZNF517	Q6ZMY9	492 aa	Predicted RBP	7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	ZNF605	Q86T29	641 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	LDB1	Q86U70	411 aa	Predicted RBP	7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	ZNF227	Q86WZ6	799 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	TMEM126B	Q8IUX1	230 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	DCUN1D3	Q8IWE4	304 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	REXO1L1P	Q8IX06	675 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	SLC35F6	Q8N357	371 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	LILRB2	Q8N423	598 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	OTUD6B	Q8N6M0	293 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	EXD3	Q8N9H8	876 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	MCU	Q8NE86	351 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	LKAAEAR1	Q8TD35	194 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	GRK7	Q8WTQ7	553 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	CPT1B	Q92523	772 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	MAGOHB	Q96A72	148 aa	Known RBP	7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	MFSD3	Q96ES6	412 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	MS4A14	Q96JA4	679 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	PPM1M	Q96MI6	270 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	RAB11FIP5	Q9BXF6	653 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	P2RY12	Q9H244	342 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	STARD5	Q9NSY2	213 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	GEMIN8	Q9NWZ8	242 aa	Known RBP	7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	SAMD15	Q9P1V8	674 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	PADI1	Q9ULC6	663 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	SNX12	Q9UMY4	172 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	NEU2	Q9Y3R4	380 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440	MRFAP1	Q9Y605	127 aa		7.41	□□□□□ -1.22
SNHG1-223	ENST00000545440		A0A0J9YY10	115 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	FAM237B	A0A1B0GVD1	139 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	IQCF5	A8MTL0	148 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	TMEM150C	B9EJG8	249 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440		H3BMM5	538 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	NKX2-8	O15522	239 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	NDUFS3	O75489	264 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	VAPB	O95292	243 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	ESR1	P03372	595 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	SNRPB2	P08579	225 aa	Known RBP	7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	TPBGL	P0DKB5	382 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	PRKAR1A	P10644	381 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	UGT2B7	P16662	529 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	ITGB6	P18564	788 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	F8A1	P23610	371 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	ATP5D	P30049	168 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	RORA	P35398	523 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	CSE1L	P55060	971 aa	Known RBP	7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	EIF3B	P55884	814 aa	Known RBP	7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	PPP2R2A	P63151	447 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	ABR	Q12979	859 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	GPS2	Q13227	327 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	KCNAB2	Q13303	367 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	KIR2DS3	Q14952	304 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	KYNU	Q16719	465 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	SLC5A12	Q1EHB4	618 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	CTSL3P	Q5NE16	218 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	ANKRD22	Q5VYY1	191 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	IZUMO3	Q5VZ72	239 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	PTRHD1	Q6GMV3	140 aa	Known RBP	7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	FBXO38	Q6PIJ6	1188 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	NAPRT	Q6XQN6	538 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	RNF111	Q6ZNA4	994 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	OTOA	Q7RTW8	1153 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	CAND1	Q86VP6	1230 aa	Known RBP	7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	HOOK3	Q86VS8	718 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	JAZF1	Q86VZ6	243 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	CILP2	Q8IUL8	1156 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	VRK3	Q8IV63	474 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	KRT222	Q8N1A0	295 aa		7.4	□□□□□ -1.22
SNHG1-223	ENST00000545440	FLVCR1-AS1	Q8TAF5	88 aa		7.4	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms