RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 SPATA7Q9P0W8 599 aa15.5■□□□□ 0.07
SPDEF-202ENST00000544425 MAN2B2Q9Y2E5 1009 aa15.5■□□□□ 0.07
SPDEF-202ENST00000544425 AP3M1Q9Y2T2 418 aa15.5■□□□□ 0.07
SPDEF-202ENST00000544425 PRR23AA6NEV1 266 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 MAGEB17A8MXT2 336 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 CACNB4O00305 520 aaPredicted RBP15.49■□□□□ 0.07
SPDEF-202ENST00000544425 ERN1O75460 977 aaKnown RBP15.49■□□□□ 0.07
SPDEF-202ENST00000544425 RPSAP08865 295 aaKnown RBP15.49■□□□□ 0.07
SPDEF-202ENST00000544425 SLC35G4P0C7Q5 338 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 TACR1P25103 407 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 CTBSQ01459 385 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 SMAD4Q13485 552 aaKnown RBP15.49■□□□□ 0.07
SPDEF-202ENST00000544425 DPY19L1Q2PZI1 675 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 CATSPEREQ5SY80 951 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 CHRDL2Q6WN34 429 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 CHST15Q7LFX5 561 aaPredicted RBP15.49■□□□□ 0.07
SPDEF-202ENST00000544425 KBTBD2Q8IY47 623 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 RNF175Q8N4F7 328 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 DENND6BQ8NEG7 585 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 CHTF18Q8WVB6 975 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 UBE2E3Q969T4 207 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 OR52E6Q96RD3 313 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 SH3GL1Q99961 368 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 PCBD2Q9H0N5 130 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 GEMIN8Q9NWZ8 242 aaKnown RBP15.49■□□□□ 0.07
SPDEF-202ENST00000544425 GMPR2Q9P2T1 348 aaKnown RBP15.49■□□□□ 0.07
SPDEF-202ENST00000544425 RIMS3Q9UJD0 308 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 MAPRE3Q9UPY8 281 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 TICRRQ7Z2Z1 1910 aa15.49■□□□□ 0.07
SPDEF-202ENST00000544425 MBTPS2O43462 519 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 MYO1DO94832 1006 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 S100A3P33764 101 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 CLCNKAP51800 687 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 ACSM2AQ08AH3 577 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 CCINQ13939 588 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 SLBPQ14493 270 aaKnown RBP eCLIP15.48■□□□□ 0.07
SPDEF-202ENST00000544425 TRIP10Q15642 601 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 AASDHQ4L235 1098 aaPredicted RBP15.48■□□□□ 0.07
SPDEF-202ENST00000544425 PYCR3Q53H96 274 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 SPIN4Q56A73 249 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 PRAMEF14Q5SWL7 426 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 PRAMEF13Q5VWM6 474 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 ACSM2BQ68CK6 577 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 CYP2R1Q6VVX0 501 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 LPCAT2Q7L5N7 544 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 RPLP0P6Q8NHW5 317 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 PPM1MQ96MI6 270 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 TSSK3Q96PN8 268 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 KCTD14Q9BQ13 255 aaPredicted RBP15.48■□□□□ 0.07
SPDEF-202ENST00000544425 ECSITQ9BQ95 431 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 MENTQ9BUN1 341 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 EFHD1Q9BUP0 239 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 KCNH6Q9H252 994 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 RMND5AQ9H871 391 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 ARMC1Q9NVT9 282 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 PPT2Q9UMR5 302 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 NEUROG3Q9Y4Z2 214 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 XIRP2A4UGR9 3374 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 SHISA7A6NL88 538 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 PCNAP12004 261 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 MAT2AP31153 395 aaKnown RBP15.48■□□□□ 0.07
SPDEF-202ENST00000544425 PIK3CBP42338 1070 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 PHC1P78364 1004 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 SRSF11Q05519 484 aaKnown RBP15.48■□□□□ 0.07
SPDEF-202ENST00000544425 MTAPQ13126 283 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 DDX39BQ13838 428 aaKnown RBP15.48■□□□□ 0.07
SPDEF-202ENST00000544425 LRIF1Q5T3J3 769 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 IER5LQ5T953 404 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 LPCAT4Q643R3 524 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 GALNT18Q6P9A2 607 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 TMEM92Q6UXU6 159 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 IZUMO2Q6UXV1 221 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 TRIM69Q86WT6 500 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 PROSER1Q86XN7 944 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 LILRA2Q8N149 483 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 CLHC1Q8NHS4 586 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 STARD8Q92502 1023 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 SLCO4A1Q96BD0 722 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 COPS7BQ9H9Q2 264 aaPredicted RBP15.48■□□□□ 0.07
SPDEF-202ENST00000544425 CCM2LQ9NUG4 571 aaPredicted RBP15.48■□□□□ 0.07
SPDEF-202ENST00000544425 VAPAQ9P0L0 249 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 MMP17Q9ULZ9 603 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 LRCH1Q9Y2L9 728 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 TDRKHQ9Y2W6 561 aaKnown RBP15.48■□□□□ 0.07
SPDEF-202ENST00000544425 SNX13Q9Y5W8 968 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 COL4A2P08572 1712 aa15.48■□□□□ 0.07
SPDEF-202ENST00000544425 TRBV5-3A0A0A0MS03 114 aa15.47■□□□□ 0.07
SPDEF-202ENST00000544425 PIPSLA2A3N6 862 aa15.47■□□□□ 0.07
SPDEF-202ENST00000544425 SLC31A1O15431 190 aa15.47■□□□□ 0.07
SPDEF-202ENST00000544425 ACP5P13686 325 aa15.47■□□□□ 0.07
SPDEF-202ENST00000544425 NDUFV2P19404 249 aa15.47■□□□□ 0.07
SPDEF-202ENST00000544425 ATP6V1B2P21281 511 aa15.47■□□□□ 0.07
SPDEF-202ENST00000544425 GRIA3P42263 894 aa15.47■□□□□ 0.07
SPDEF-202ENST00000544425 KIAA1024LP59773 190 aa15.47■□□□□ 0.07
SPDEF-202ENST00000544425 PPP2CBP62714 309 aa15.47■□□□□ 0.07
SPDEF-202ENST00000544425 PPP2CAP67775 309 aa15.47■□□□□ 0.07
SPDEF-202ENST00000544425 TSTA3Q13630 321 aaPredicted RBP15.47■□□□□ 0.07
SPDEF-202ENST00000544425 RUNDC3AQ59EK9 446 aa15.47■□□□□ 0.07
SPDEF-202ENST00000544425 THEMIS2Q5TEJ8 643 aa15.47■□□□□ 0.07
SPDEF-202ENST00000544425 PDSS2Q86YH6 399 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms